Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00828 | ACCCGCAATCCGTTGAAGTTTTGCCGGAGAAATATGGTGGAGGAAGACTCCCCTCAGTGTTCGGGCCAGCTTCATGTTTTGGCTGTTGACGATAGCCATGTTGATCGGAAGGTCATTGAGAGGCTGCTTAGGATCTCTTCTTGTAAAGTTACGGCAGTAGAAAGTGGTACAAGAGCTCTGCAGTTTCTGGGGTTGGACGGAGCAAAAACATCTGGGATTGATGGTTTGAAAGTGAATCTGATAATGACAGATTACTCCATGCCTGGAATGACAGGATATGAATTGCTGAAAAGGATCAAGGAATCATCAGATTTTAGAGATGTCCCGGTCGTCGTGATGTCATCGGAGAACATCTTAGCTCATATCCACAGGCAATTCCCCTCTTTCAACCGGGCCAAGGAATTTATCGTCAAGCCAGTGAAACTATCAGACGTGACGCGATTGAAAGATTTCCTGATAACGAAGAGAAAAGGCGAAGAAACTGGAGAGCAGAGTCTGCCAAAGAGGGAGCTTCGACCCGACGAAAATGGGTTCTCGAATGATCCAATGCCGGCAATGCAGAATTGGGCGATGTTGTGTACTCAACTGCACAAGAAGCCTAGATTGTGCAAGATGGATTGA | 621 | 46.54 | TRNPLKFCRRNMVEEDSPQCSGQLHVLAVDDSHVDRKVIERLLRISSCKVTAVESGTRALQFLGLDGAKTSGIDGLKVNLIMTDYSMPGMTGYELLKRIKESSDFRDVPVVVMSSENILAHIHRQFPSFNRAKEFIVKPVKLSDVTRLKDFLITKRKGEETGEQSLPKRELRPDENGFSNDPMPAMQNWAMLCTQLHKKPRLCKMD | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 6372462 | 6373518 | + | Bda027600.1 | Bda14g00828 | 20879 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00828 | 206 | MobiDBLite | consensus disorder prediction | 159 | 179 | - | - | |
Bda14g00828 | 206 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR6 | 20 | 176 | - | - | |
Bda14g00828 | 206 | SMART | REC_2 | 24 | 149 | IPR001789 | GO:0000160 | |
Bda14g00828 | 206 | Pfam | Response regulator receiver domain | 26 | 145 | IPR001789 | GO:0000160 | |
Bda14g00828 | 206 | Gene3D | - | 24 | 201 | - | - | |
Bda14g00828 | 206 | MobiDBLite | consensus disorder prediction | 159 | 176 | - | - | |
Bda14g00828 | 206 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 20 | 176 | IPR045279 | GO:0009736 | |
Bda14g00828 | 206 | CDD | REC_typeA_ARR | 26 | 148 | - | - | |
Bda14g00828 | 206 | SUPERFAMILY | CheY-like | 23 | 156 | IPR011006 | - | |
Bda14g00828 | 206 | ProSiteProfiles | Response regulatory domain profile. | 25 | 153 | IPR001789 | GO:0000160 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g01007 | Bda-Chr10:44240060 | Bda14g00828 | Bda-Chr14:6372462 | 6.67E-55 | dispersed | |
Bda14g00441 | Bda-Chr14:3161064 | Bda14g00828 | Bda-Chr14:6372462 | 1.69E-27 | dispersed | |
Bda14g00828 | Bda-Chr14:6372462 | Bda15g00091 | Bda-Chr15:3136179 | 3.34E-39 | dispersed | |
Bda11g01678 | Bda-Chr11:50923039 | Bda14g00828 | Bda-Chr14:6372462 | 8.73E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17064 | PF00072 | Response_reg | 5.90E-17 | CL0304 | Bda | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00828 | K14492 | - | zju:107419317 | 209.149 |