Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00828 ACCCGCAATCCGTTGAAGTTTTGCCGGAGAAATATGGTGGAGGAAGACTCCCCTCAGTGTTCGGGCCAGCTTCATGTTTTGGCTGTTGACGATAGCCATGTTGATCGGAAGGTCATTGAGAGGCTGCTTAGGATCTCTTCTTGTAAAGTTACGGCAGTAGAAAGTGGTACAAGAGCTCTGCAGTTTCTGGGGTTGGACGGAGCAAAAACATCTGGGATTGATGGTTTGAAAGTGAATCTGATAATGACAGATTACTCCATGCCTGGAATGACAGGATATGAATTGCTGAAAAGGATCAAGGAATCATCAGATTTTAGAGATGTCCCGGTCGTCGTGATGTCATCGGAGAACATCTTAGCTCATATCCACAGGCAATTCCCCTCTTTCAACCGGGCCAAGGAATTTATCGTCAAGCCAGTGAAACTATCAGACGTGACGCGATTGAAAGATTTCCTGATAACGAAGAGAAAAGGCGAAGAAACTGGAGAGCAGAGTCTGCCAAAGAGGGAGCTTCGACCCGACGAAAATGGGTTCTCGAATGATCCAATGCCGGCAATGCAGAATTGGGCGATGTTGTGTACTCAACTGCACAAGAAGCCTAGATTGTGCAAGATGGATTGA 621 46.54 TRNPLKFCRRNMVEEDSPQCSGQLHVLAVDDSHVDRKVIERLLRISSCKVTAVESGTRALQFLGLDGAKTSGIDGLKVNLIMTDYSMPGMTGYELLKRIKESSDFRDVPVVVMSSENILAHIHRQFPSFNRAKEFIVKPVKLSDVTRLKDFLITKRKGEETGEQSLPKRELRPDENGFSNDPMPAMQNWAMLCTQLHKKPRLCKMD 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6372462 6373518 + Bda027600.1 Bda14g00828 20879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00828 206 MobiDBLite consensus disorder prediction 159 179 - -
Bda14g00828 206 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 20 176 - -
Bda14g00828 206 SMART REC_2 24 149 IPR001789 GO:0000160
Bda14g00828 206 Pfam Response regulator receiver domain 26 145 IPR001789 GO:0000160
Bda14g00828 206 Gene3D - 24 201 - -
Bda14g00828 206 MobiDBLite consensus disorder prediction 159 176 - -
Bda14g00828 206 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 176 IPR045279 GO:0009736
Bda14g00828 206 CDD REC_typeA_ARR 26 148 - -
Bda14g00828 206 SUPERFAMILY CheY-like 23 156 IPR011006 -
Bda14g00828 206 ProSiteProfiles Response regulatory domain profile. 25 153 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01007 Bda-Chr10:44240060 Bda14g00828 Bda-Chr14:6372462 6.67E-55 dispersed
Bda14g00441 Bda-Chr14:3161064 Bda14g00828 Bda-Chr14:6372462 1.69E-27 dispersed
Bda14g00828 Bda-Chr14:6372462 Bda15g00091 Bda-Chr15:3136179 3.34E-39 dispersed
Bda11g01678 Bda-Chr11:50923039 Bda14g00828 Bda-Chr14:6372462 8.73E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17064 PF00072 Response_reg 5.90E-17 CL0304 Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00828 K14492 - zju:107419317 209.149