Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00837 ATGGCAGCTAGAGCATCTCGAACCGAGAACCAAGATGCAATAGATACTGCCATTGTTGGAATGCTTGCCGATCCAAAGGAGGCACGGGCCAATATTCAGGAAATACACTTCCTTCCATTCAATCCTACCGACAAGCGAACAGCATTGACATATATTGATCGTGATGGTAAGATGCATAGAGTTAGCAAAGGTGCTCCTGAACAGATTCTGAATCTTGCACACAATAAGTCGGACATTGATCGTAGAGTTCATGCCGTGATTGACAAGTTTGCAGAACGAGGTTTACGATCGCTGGCAGTAGCATACCAGGAAGTTCCCGAGGGAAGGAAAGATAGTGCTGGAGGTCCATGGCAGTTCATTGGTCTCTTACCTCTATTCGACCCTCCACGCCATGACAGTGCAGAAACTATAAGAAGGGCCTTAAACCTTGGAGTTAATGTAAAAATGATCACTGGAGATCAACTTGCAATAGGAAAGGAAACCGGACGCCGTTTAGGAATGGGAACAAATATGTATCCCTCGTCTGCTTTGTTAGGACAGGAGAAGGATGAGTCTATTGCTGCCTTACCAATTGATGAACTGATCGAAAAAGCCGATGGGTTTGCTGGCGTTTTCCCTGAGCACAAGTACGAGATTGTGAAACGCTTACAAGCTAGAAAACACATATGCGGAATGACTGGAGATGGTGTGAATGATGCTCCTGCCCTTAAAAAGGCCGACATTGGAATAGCAGTTGCCGATGCTACCGATGCAGCCCGTAGTGCTTCAGACATTGTTCTTACCGAGCCTGGACTCAGTGTTATCATAAGTGCTGTTTTAACGAGTCGAGCAATTTTTCAGAGGATGAAGAATTACACGATTTATGCAGTGTCTATTACGATCCGTATTGTGCTTGGTTTCATGTTACTTGCTCTTATTTGGAAATTCGACTTTCCACCTTTTATGGTGCTTATCATTGCCATCCTTAATGATGGTACAATCATGACAATATCAAAGGATAGAGTCAAGCCATCACCCCTGCCGGATAGTTGGAAACTGGCTGAAATTTTTACGACTGGGGTTATACTCGGTAGCTACATGGCCGTGATGACTGTCATATTTTTCTGGGCAGCATATAAAACAGATTTTTTCCCAAGAACGTTTGGTGTATCGACACTCGAGAAAACAGCGCATGATGACTTCCGAAAGCTTGCCTCAGCAGTATATTTGCAAGTGAGCACGATAAGTCAAGCTCTCATATTTGTCACTCGGTCTAGAAGTTGGTCCTACGTTGAGCGTCCTGGGATTTTACTTCTTGTGGCTTTCATCATTGCCCAGCTGATTGCCACCTTAATCGCTGTCTATGCTAACTGGAGCTTTGCTGCCATTGAAGGAATTGGGTGGGGTTGGGCTGGTGTTGTCTGGCTATACAACATCATCTTCTACATCCCACTTGATTTCATCAAGTTCTTTATTCGATATGCTCTGAGCGGTAAAGCTTGGGACCTCGTTATCGAGCAAAGGATTGCATTCACAAGACAGAAAGACTTCGGAAAAGAACAACGTGAGCTTCAATGGGCGCATGCACAAAGAACATTGCACGGACTGCAACCTCCCGACGCCAAGATGTTCACCGAGCGAACCCATTTCACAGAACTTAATAACATGGCTGAGGAAGCTAAAAGAAGAGCTGAAATTGCCAGGTTACGAGAACTGCACACGCTGAAAGGTCATGTCGAATCAGTGGTGAGATTGAAGGGTCTCGACATCGAAACGATTCAGCAAGCTTACACGGTGTGA 1779 45.03 MAARASRTENQDAIDTAIVGMLADPKEARANIQEIHFLPFNPTDKRTALTYIDRDGKMHRVSKGAPEQILNLAHNKSDIDRRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQEKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGSYMAVMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAVYLQVSTISQALIFVTRSRSWSYVERPGILLLVAFIIAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNIIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDAKMFTERTHFTELNNMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6442082 6445361 + Bda027611.1 Bda14g00837 20888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00837 592 PRINTS H+-transporting ATPase (proton pump) signature 402 423 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda14g00837 592 PRINTS H+-transporting ATPase (proton pump) signature 226 242 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda14g00837 592 PRINTS H+-transporting ATPase (proton pump) signature 83 101 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda14g00837 592 PRINTS H+-transporting ATPase (proton pump) signature 198 214 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda14g00837 592 PRINTS H+-transporting ATPase (proton pump) signature 257 282 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda14g00837 592 SUPERFAMILY HAD-like 118 272 IPR036412 -
Bda14g00837 592 Gene3D - 1 126 IPR023299 GO:0000166
Bda14g00837 592 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 201 314 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda14g00837 592 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 7 132 IPR023299 GO:0000166
Bda14g00837 592 PANTHER PLASMA MEMBRANE ATPASE 1 572 - -
Bda14g00837 592 Gene3D - 127 263 IPR023214 -
Bda14g00837 592 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 2 448 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda14g00837 592 Gene3D - 541 592 - -
Bda14g00837 592 PANTHER CALCIUM-TRANSPORTING ATPASE 1 572 - -
Bda14g00837 592 Pfam haloacid dehalogenase-like hydrolase 55 240 - -
Bda14g00837 592 PRINTS P-type cation-transporting ATPase superfamily signature 121 132 - -
Bda14g00837 592 PRINTS P-type cation-transporting ATPase superfamily signature 226 245 - -
Bda14g00837 592 PRINTS P-type cation-transporting ATPase superfamily signature 249 261 - -
Bda14g00837 592 PRINTS P-type cation-transporting ATPase superfamily signature 143 153 - -
Bda14g00837 592 SUPERFAMILY Calcium ATPase, transmembrane domain M 275 489 IPR023298 -
Bda14g00837 592 Coils Coil 543 563 - -
Bda14g00837 592 Gene3D - 264 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00837 Bda-Chr14:6442082 Bda02g00275 Bda-Chr2:41226892 0 dispersed
Bda11g01685 Bda-Chr11:50986235 Bda14g00837 Bda-Chr14:6442082 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00837 K01535 - cpap:110819640 1108.59