Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00849 ATGGCTGAGGAAAACAGATTGGTGTTTTATGGAATGTGGGCAAGTCCTTACGTAGTGATGGTGGAAATAGCATTGAAAGTTAAAGGCGTGGCCTTTGAGTACGTGGAAGAAGATTTGATGAACAAAAGTGAATCGCTTCTCAAATACAATCCTGTTCATAAGAAAGTTCCAGTTCTTGTTCACAATGGAAAACCCATCGCAGAATCGCTTGTCATTCTTGAATACATTGATGAAACTTGGAAGAATGGTAGTCCTTCCCTACTGCCTCAAGATCCCTACCAAAGAGCTCAAGTTCGATTCTGGGTTGCCTTTCTGCAGCAACAGGTGATTGATAAAGTGGTAGAAGCAACAAGGGCAGGAGGAGGAGAAGCACAAGAAGAAGGCTTAAACGAAGTGAGGAAGAAACTAAAAGTTTTCGAAGGGGGATTGAAGGATTTACTTCCGAACCACACTCCGTTCGTAAATGGACACCAACTGGGGATTTTGGAGATTATAATGGCCTCAGCATTCGGCCCTTACAAGGCTCTCGAACAAGCCCTTGGAATTAAGGTGATAGACCAAGATAATACTCCATTCGTTTTCGCTTGGTTGCAAGCTCTAATCGACCTCCCGATCGTGAAACAAGCTACCCCTCCTCCCGATAAAATGGTGGTCTTTCTTCAGTTCTTCAGGCAACGCGCCGGAAAATTGCCTGCAGCTTGA 702 44.44 MAEENRLVFYGMWASPYVVMVEIALKVKGVAFEYVEEDLMNKSESLLKYNPVHKKVPVLVHNGKPIAESLVILEYIDETWKNGSPSLLPQDPYQRAQVRFWVAFLQQQVIDKVVEATRAGGGEAQEEGLNEVRKKLKVFEGGLKDLLPNHTPFVNGHQLGILEIIMASAFGPYKALEQALGIKVIDQDNTPFVFAWLQALIDLPIVKQATPPPDKMVVFLQFFRQRAGKLPAA 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6537819 6538678 + Bda027622.1 Bda14g00849 20900

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00849 233 Gene3D - 88 230 - -
Bda14g00849 233 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Bda14g00849 233 SUPERFAMILY GST C-terminal domain-like 78 226 IPR036282 -
Bda14g00849 233 CDD GST_C_Tau 92 223 IPR045074 GO:0004364|GO:0006749
Bda14g00849 233 PANTHER GLUTATHIONE S-TRANSFERASE 1 228 - -
Bda14g00849 233 Pfam Glutathione S-transferase, N-terminal domain 9 78 IPR004045 -
Bda14g00849 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 228 IPR045073 -
Bda14g00849 233 SFLD Main.3: Omega- and Tau-like 4 227 IPR045073 -
Bda14g00849 233 Gene3D Glutaredoxin 1 87 - -
Bda14g00849 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 230 IPR010987 -
Bda14g00849 233 CDD GST_N_Tau 7 80 - -
Bda14g00849 233 SFLD Glutathione Transferase (cytosolic) 4 227 IPR040079 -
Bda14g00849 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00849 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - vvi:100260496 289.271
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00806 Bda-Chr12:37180057 Bda14g00849 Bda-Chr14:6537819 4.17E-41 dispersed
Bda12g00808 Bda-Chr12:37256720 Bda14g00849 Bda-Chr14:6537819 2.17E-39 dispersed
Bda14g00849 Bda-Chr14:6537819 Bda01g00194 Bda-Chr1:24604886 2.16E-49 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g547 . . . . . . . . Cmo13g01183 . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa01g00544 Chy12g01545 . . . . Bda14g00849 . . Bma03g00824 . Sed08g2065 . . Cma13g01129 . . . . . Bhi08g01175 Tan05g2447 Cmetu10g1222 Lac10g0073 Hepe07g2513 . . Cla04g01202 Cam04g1264 Cec01g1774 Cco01g1822 Clacu04g1293 Cmu04g1269 Cre01g1562 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001282 1 2 2 3 1 3 0 4 4 3 1 4 2 5 2 1 4 1 1 2 3 3 1 6 4 1 2 3 2 4 75
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00849 Bda_Chr14 FPKM 3.492064 3.690851 2.135614 3.280768 1.804568 2.766576 2.121856 2.388841 3.348064