Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00865 ATGGTTTCCGAGAAAATTCATCGGAAAACCGTTTGTGTGATCGGAGCTGGACCATCCGGGCTAGTGGCAGCAAGAGAGCTGAGAAAAGAAGGGCACGAGGCAGTTGTTTTAGAACAAAACCATGAAGTGGGAGGACAATGGCTGTACAACCCAAATGTGGAGTGTGAGGATCCCTTAGGAAGGGACGCTTTTCTAAAGGTTCATAGCAGTATTTACTCATCTTTAAGGCTCACTTCTCCGAGAGAAATCATGGGTTTTACAGATTTTCCATTCTTGGTGAAGAAAGATAGGGATATGAGAAGGTTTCCTAACCACAAGGAACTTCTTTTGTACCTTGTAGATTTCTGTGACTGGTTTGGATTGAGAGAGATGATAAGGTTTAATTGTAGAGTAGAATATGTTGGGATTTGGGATTTTGCTGCTGTTGGAAAGGATTTGAAATGGGTTGTGAGAAGTAAAGTAAAAGGGAATGAAAACAAGGTAGTGGAAGAAGTTTTTGATGCTGTTGTTGTGGCTACTGGCCATTATTCTCATCCTAGATTACCTCCGATTGAAGGAATTAATACATGGAGAAGGAAGCAAATGCATAGTCATGTTTACAGAGGTCCTGAGCCATTTCACAATGAGGTTGTGGTGGTGGTTGGAAACTCTCTTAGCGGGCAAGACATATCCTTGGAGCTCGTGATTGTGGCTAAGGAAGTTCACATCAGTGCTAAATCTCTTAATATTTCTCCAGGCTTGTCTAAAGTCATTGCCAAACATCACAATTTACAGCTCCATCCCCAGATTGAATCACTGAAAGAAGATGGTCGTGTTGAATTTGTGGATGGGTCTTGGATTATTGCAGATACTGTCATGTACTGTACTGGGTATTCATATAAGTTTCCATTTCTTGACACCAAAGGAATAGTTGATGTAGATGATGATAGAGTGGGGCCTTTGTATGAGCATACCTTCCCTCCTTCACTTGCTCCCTCTCTCTCCTTTATAGGCATTCCAAGAAAGGTGATAGGGTTTCCTTTTTTTGAGGCACAAGCAAAATGGATAGCTGAGTTGCTGTCTGAGAAAAGAGCATTACCATCATGGGAGGAGATGATGTCCTCCATTCATGACTTTTACCTCTCTAGGGATCTTGCTTCCATCCCCAACCATAATACCCATGATATTGCTAATTTTGAGTATTGTGATAAATATGGAGATAATGTTGGATTCCCACACTTGGAAGAATGGAGGAAACAGCTGTGCTTATCAGCCTTGATGAATGCTGATTCAAATCTGGACACATACAGAGATTCTTGGAATGATGATGAACTGCTTCAACAGGCCTATCACAGTCCCCATTTCACTCAATATCACCCTTCAATTTAA 1368 41.45 MVSEKIHRKTVCVIGAGPSGLVAARELRKEGHEAVVLEQNHEVGGQWLYNPNVECEDPLGRDAFLKVHSSIYSSLRLTSPREIMGFTDFPFLVKKDRDMRRFPNHKELLLYLVDFCDWFGLREMIRFNCRVEYVGIWDFAAVGKDLKWVVRSKVKGNENKVVEEVFDAVVVATGHYSHPRLPPIEGINTWRRKQMHSHVYRGPEPFHNEVVVVVGNSLSGQDISLELVIVAKEVHISAKSLNISPGLSKVIAKHHNLQLHPQIESLKEDGRVEFVDGSWIIADTVMYCTGYSYKFPFLDTKGIVDVDDDRVGPLYEHTFPPSLAPSLSFIGIPRKVIGFPFFEAQAKWIAELLSEKRALPSWEEMMSSIHDFYLSRDLASIPNHNTHDIANFEYCDKYGDNVGFPHLEEWRKQLCLSALMNADSNLDTYRDSWNDDELLQQAYHSPHFTQYHPSI 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6676648 6679856 - Bda027640.1 Bda14g00865 20916

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00865 455 Gene3D - 11 432 IPR036188 -
Bda14g00865 455 PIRSF FMO 239 403 IPR000960 GO:0050660|GO:0050661
Bda14g00865 455 PIRSF FMO 7 243 IPR000960 GO:0050660|GO:0050661
Bda14g00865 455 SUPERFAMILY FAD/NAD(P)-binding domain 254 416 IPR036188 -
Bda14g00865 455 Gene3D - 183 288 IPR036188 -
Bda14g00865 455 Pfam Flavin-binding monooxygenase-like 257 371 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bda14g00865 455 Pfam Flavin-binding monooxygenase-like 9 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bda14g00865 455 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Bda14g00865 455 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Bda14g00865 455 PRINTS Flavin-containing monooxygenase (FMO) signature 222 237 IPR000960 GO:0050660|GO:0050661
Bda14g00865 455 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
Bda14g00865 455 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Bda14g00865 455 SUPERFAMILY FAD/NAD(P)-binding domain 8 237 IPR036188 -
Bda14g00865 455 PANTHER DIMETHYLANILINE MONOOXYGENASE 6 452 - -
Bda14g00865 455 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 6 452 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00865 - - - pvy:116107807 738.413
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00865 Bda-Chr14:6676648 Bda02g00446 Bda-Chr2:45103652 3.16E-15 dispersed
Bda14g00865 Bda-Chr14:6676648 Bda09g01155 Bda-Chr9:42307013 7.28E-16 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g609 Blo04g00784 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00096 . Chy12g01520 Cme12g01966 . . . Bda14g00865 . . Bma03g00842 . Sed08g2095 . . . . . . . . Bhi08g01127 Tan05g2408 Cmetu06g2174 . Hepe07g1737 . . Cla04g01176 Cam04g1233 Cec01g1744 Cco01g1790 Clacu04g1261 Cmu04g1240 Cre01g1534 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009615 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00865 Bda_Chr14 FPKM 10.486645 9.48107 13.696071 12.874175 12.248669 9.823988 13.338347 14.48188 14.680948