Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00880 TTTGGTGTTCATTTCGAGGAGCTTTTTTCTGGTTTGGAGGATTTGAAGCCTGGAATTCCAGCTCTTGAGGAAGAGAGCCATGTTATAATTGCTCTCCAACACATTTTGAGAGCATTAGTACCAAGTCAGAATCTTACGGATGATTTTAGAGAGATCCTTATTGATGTCGATTCTCGCTTGTCTTCCATGGTTGTTTTTACCCAACACAATGCTCAGGAATTCAGTGATGTTGAAAAGCAGCTCAGATCAGCCATGGAAAAGATTCAGAAGTTGGATTTGAATCGAACGATGATGCTGGATTGCGAATATTTGAAGACTGTCGTTGAAATTCATAAATTAGTAACTATTTTACTCCCAAGATCAGAGGAATACGTTATGGATTTGCTCGATCCGCATTTGATTCCTCGTCTAAAGTCGATAGCTGAGGTAATGTTTATGTTGGCTTATGAAAAGGAGTTCTGTCAAGCTTTCGTTAATTCTCGAAGAAATGCGTTAGATGACTACTTGATTGCTCTCGGAATGGAAATATTCAGCATTGATGATTTGAAGAAGATGAGATGGACTTTCTTGAACAAATTTATCAAGAAATGGGTCGAAGAGATGAAGGTAATCGTCCAGGACTATCTTGTCAGTGAGAAAATGATCAGCAAACAGACCCTGGAAGGATTTGAAACTGTTAATTCACTTTGTTTCTTAGAAATCTCAAAGATACCGATTCTTCGACTGTTAAATTGTGGTTTCGCCATTTCAATGGGACCGCATTGGCCTGAGATGCTGTTTAGCTTACTCGACATGTACGAGGTTTTGTTGAAGCTTCTCTTCGATGTAGACTGCAAAATCTACACATGCAATTCGGTAACCGTTTACAGTCCCTCCCTCAATGATATCCTCATAGAAGAACAAGAAGACGATTCCAAACCGAACGATGATGTTCCGAGTGGAAACGAGCTGTGTTCTTCCACAGATTGTCCCACTGCCTCACAGCTCAAGTTATTCACATCTCACTTAATCTCAAATCTGTATAAAAAATCAGAATTATACAAGGACGAGGCTTTACAGAGCATATTCTTGACTAACAACATCCATTACATGGTTCAAGATCTCAGCCACTTTTTCGGAAACGAATGGATCCGGGATCATAAAGTGATGTTTCGGAAGCAGGCCACGATGCTTAACTTCGGTTGTAATGGCCAAAAGAAAAGAGGCTTTACCAATCCCTATGAAGAAATCTACAAGAGACAAACAGTGTGGTCTATTCCCAACGCTCAGCTGAGAGATGAATTACAGATTTCTACATCACAGAAAGTCATCCTTGCCTATCAAACTTGGCGGTCAAAAAATCTGTTGCCTGGTCGAGAGAAGCATGCGAAGTACTGCAGTGACAATTTCGGAAAATACATTTTGGATTTTTTCGAAGCCAAGCAACGATCTTTGAATAATCGACACAGGAGGTGA 1455 40.14 FGVHFEELFSGLEDLKPGIPALEEESHVIIALQHILRALVPSQNLTDDFREILIDVDSRLSSMVVFTQHNAQEFSDVEKQLRSAMEKIQKLDLNRTMMLDCEYLKTVVEIHKLVTILLPRSEEYVMDLLDPHLIPRLKSIAEVMFMLAYEKEFCQAFVNSRRNALDDYLIALGMEIFSIDDLKKMRWTFLNKFIKKWVEEMKVIVQDYLVSEKMISKQTLEGFETVNSLCFLEISKIPILRLLNCGFAISMGPHWPEMLFSLLDMYEVLLKLLFDVDCKIYTCNSVTVYSPSLNDILIEEQEDDSKPNDDVPSGNELCSSTDCPTASQLKLFTSHLISNLYKKSELYKDEALQSIFLTNNIHYMVQDLSHFFGNEWIRDHKVMFRKQATMLNFGCNGQKKRGFTNPYEEIYKRQTVWSIPNAQLRDELQISTSQKVILAYQTWRSKNLLPGREKHAKYCSDNFGKYILDFFEAKQRSLNNRHRR 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6809627 6811386 + Bda027658.1 Bda14g00880 20931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00880 484 Gene3D Exocyst complex component Exo70 282 481 - -
Bda14g00880 484 Gene3D Exocyst complex component Exo70 41 281 - -
Bda14g00880 484 Pfam Exo70 exocyst complex subunit 284 390 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bda14g00880 484 Pfam Exo70 exocyst complex subunit 401 468 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bda14g00880 484 Pfam Exo70 exocyst complex subunit 195 277 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bda14g00880 484 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 34 117 - -
Bda14g00880 484 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 287 477 - -
Bda14g00880 484 Coils Coil 74 94 - -
Bda14g00880 484 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 117 IPR004140 GO:0000145|GO:0006887
Bda14g00880 484 PANTHER EXOCYST COMPLEX PROTEIN EXO70 121 278 IPR004140 GO:0000145|GO:0006887
Bda14g00880 484 SUPERFAMILY Cullin repeat-like 69 472 IPR016159 -
Bda14g00880 484 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 121 278 - -
Bda14g00880 484 PANTHER EXOCYST COMPLEX PROTEIN EXO70 287 477 IPR004140 GO:0000145|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00880 Bda15g00670 CCT
Bda14g00880 Bda15g00670 ECH
Bda11g01727 Bda14g00880 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00880 Bda-Chr14:6809627 Bda11g01602 Bda-Chr11:49652969 8.78E-57 dispersed
Bda11g01724 Bda-Chr11:51691874 Bda14g00880 Bda-Chr14:6809627 6.95E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00880 K07195 - vvi:100265529 278.87