Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00885 AAGATGATTTTGAATCCAAAAGAAAAGGGTAAGGTTCAAGCAAAGCAAGAGGGTGAGATAAGCAACTATGGGAAGCTCTCCATGGCATCTTCAAGTGCAAGGCAATGGTTGGGCTTGAGGAACCCGAGAATTGTTCGAGTTTCTCGATCGTTCGGAGGAAAAGATCGACATAGTAAAGTATGCACAATTAGAGGATTGAGAGACAGAAGGATTAGGCTTTCAGTCCCCACTGCAATTCAGCTTTATGATCTTCAAGAACGGCTCGGCCTCGGCCAGCCCAGCAAGGTGATCGATTGGCTGCTAGAAGTCACCAAACTCGATATCAATAAGCTCCCTCCTCTCCAAATTCCTCAAGGATTTGGCCAATTCCCTCAACAGATGCTTGTTTCTCATGATTTTGTCAACAGTCAATCTTCATCAATTCCTCCATTTTTTGACTCTGCAAATACTTCTTCAGAATTTGTGAAGGGTGGTTTGGAAGATAATGATCCAGTGAGAGCAAAAAGTAAAGGGAAGTGGACAAGTGATCACACAAGTCAAGATAGAATTGCTGATTTTCCTACACATATTGGAGCACATAATTTTCTTCTCAACAATTCTCTTTCTGAAAATACTTCCAGTTCATCACTGGGAGGAGGGCAACCACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCGCCGCAAATCGAAGATCATCACCCGAGCGAAGCCCCTTTCTTCGCCCCGTCGGGATCTCAGCTTTTATTCTATCCGCCATCGACGATGCCTACACTTTTTACTCCTTATCCTTCCTATATCACTACCCAAGTTGAGAACGATCAAAGGCAATTCAACCATTTTCAACTCCTCGGATCGAGTTTATCCGTCGTACCCACGCTTCATTCATTTCCAAAGCTTCTCATTTCGCAAAACAATGGAAGCCAACAGAAAGACAATGCCACCGGCTCATGA 2424 16.71 KMILNPKEKGKVQAKQEGEISNYGKLSMASSSARQWLGLRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQERLGLGQPSKVIDWLLEVTKLDINKLPPLQIPQGFGQFPQQMLVSHDFVNSQSSSIPPFFDSANTSSEFVKGGLEDNDPVRAKSKGKWTSDHTSQDRIADFPTHIGAHNFLLNNSLSENTSSSSLGGGQPHIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYSPQIEDHHPSEAPFFAPSGSQLLFYPPSTMPTLFTPYPSYITTQVENDQRQFNHFQLLGSSLSVVPTLHSFPKLLISQNNGSQQKDNATGS 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6837818 6840241 + Bda027664.1 Bda14g00885 20936

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00885 807 ProSiteProfiles TCP domain profile. 53 111 IPR017887 -
Bda14g00885 807 PANTHER TRANSCRIPTION FACTOR TCP17 2 175 - -
Bda14g00885 807 Pfam TCP family transcription factor 53 156 IPR017887 -
Bda14g00885 807 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 175 IPR005333 GO:0003700
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00885 - - - tcc:18604854 209.534
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda11g01762 Bda14g00885 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01736 Bda-Chr11:52030918 Bda14g00885 Bda-Chr14:6837818 3.82E-41 dispersed
Bda13g01720 Bda-Chr13:40523880 Bda14g00885 Bda-Chr14:6837818 8.57E-41 dispersed
Bda14g00885 Bda-Chr14:6837818 Bda08g00340 Bda-Chr8:3475479 2.10E-91 dispersed
Bda03g01000 Bda-Chr3:9132012 Bda14g00885 Bda-Chr14:6837818 7.05E-53 transposed
Bda05g00230 Bda-Chr5:33296552 Bda14g00885 Bda-Chr14:6837818 2.51E-140 transposed
Bda11g01762 Bda-Chr11:52454642 Bda14g00885 Bda-Chr14:6837818 3.60E-41 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g460 Blo04g00796 . . . Bpe12g00521 . Bma06g00019 . Cmo13g01114 . . Cma11g00212 Car10g00278 Car11g00191 Sed08g0281 Cpe20g00081 Cpe04g01456 Bhi02g00091 Tan09g2038 Cmetu07g0568 . Hepe09g0277 . . Cla06g01535 Cam06g1693 Cec06g1756 Cco06g1755 Clacu06g1661 Cmu06g1607 Cre06g2419 . . . . . Csa01g00607 Chy12g01493 Cme12g01933 . . Bda11g01762 Bda14g00885 . Bpe15g00574 Bma03g00857 Bma08g00244 Sed01g2290 Cmo10g00314 Cmo11g00214 Cma13g01069 . Car13g00905 . . Cpe18g00710 Bhi08g01077 Tan05g2351 Cmetu12g1931 Lac10g0172 Hepe07g2456 . . Cla04g01148 Cam04g1204 Cec01g1716 Cco01g1761 Clacu04g1231 Cmu04g1211 Cre01g1507 Lsi06g01407 Csa01g00299 Chy02g02437 Cme02g01824
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda15g00079 . 35 261 TCP Transcription Factor Family AT5G23280 53.2 1.3e-52 203.4
Bda14g00462 . 35 261 TCP Transcription Factor Family AT5G23280 52.7 1.3e-52 203.4
Bda14g00488 . 35 261 TCP Transcription Factor Family AT5G23280 52.7 1.3e-52 203.4
Bda15g00075 . 35 260 TCP Transcription Factor Family AT5G23280 53.0 2.3e-52 202.6
Bda14g00846 CCT,ECH 68 170 TCP Transcription Factor Family AT3G47620 80.8 3.0e-40 163.3
Bda12g00454 . 1 287 TCP Transcription Factor Family AT3G27010 53.4 1.2e-66 250.4
Bda07g01383 . 7 243 TCP Transcription Factor Family AT3G27010 57.9 4.5e-58 221.9
Bda14g00462 . 1 259 TCP Transcription Factor Family AT5G08330 51.9 2.8e-60 228.8
Bda14g00488 . 1 259 TCP Transcription Factor Family AT5G08330 51.9 2.8e-60 228.8
Bda15g00079 . 35 259 TCP Transcription Factor Family AT5G08330 54.1 5.1e-54 208.0
Bda15g00075 . 35 258 TCP Transcription Factor Family AT5G08330 53.3 7.4e-53 204.1
Bda12g00823 BCT 18 223 TCP Transcription Factor Family AT1G53230 52.1 2.4e-45 179.9
Bda09g00513 . 18 272 TCP Transcription Factor Family AT3G15030 50.4 1.3e-55 214.2
Bda14g00885 BCT 31 173 TCP Transcription Factor Family AT5G60970 57.6 3.7e-40 162.5
Bda14g01404 . 23 209 TCP Transcription Factor Family AT2G31070 54.0 4.7e-43 172.2
Bda15g00870 . 8 192 TCP Transcription Factor Family AT2G31070 53.5 2.2e-40 163.3
Bda15g00925 . 25 208 TCP Transcription Factor Family AT2G31070 53.3 2.9e-40 162.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006954 1 1 2 2 3 1 2 1 1 1 1 1 1 1 1 2 1 0 2 1 1 1 1 1 1 1 1 2 1 1 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17071 PF03634 TCP 4.70E-24 No_clan Bda TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00885 Bda_Chr14 FPKM 3.934363 2.897135 0.0 0.0 0.0 0.0 0.0 0.0 0.0