Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00907 ATGAAGATTTCTGAAAGTGTGCATCTTCTTCTTATCCTTGTCTGTCTGAGCGTCTTCTGTAGAGGCCAAACAGAACCTTCAATGTCTGCCATGGAGAAAGAAGAACAAGAAGCCCTATATTCAACTGTTCAAGGATTTGTGGGAAAATGGTGGAATGGTTCAGATCTTTATCCAGATCCTTGTGGATGGACTCCAATTCAGGTTTTCATTAATTTTCTTCTCTTCTCTATTACTACTCCTTTTGTTCAATGCAGTATTGGTTTTCATGTACAGGGAGTTAGTTGTGATCTCTATGGTGGATTTTGGTACGTCAGTGAACTGAAAATTGGATCAACTTTTGAAAACTCTCTCCAATGCAATGAATCAGCCATTTTTACACATCATTTGTTCAAGCTCAAGTACCTGAGAAGTCTGTCGTTCTTCAATTGCTTTCTCTCATCCAGCCAAAACCCAGTTGCAATTCCATCTTCAAACTGGGAAAAATTCACCGACACGTTGGAATCGCTAAAGTTCAGATCGAATCAAGGCCTGGTCGGATCGATTCCCACGAGTCTAGGGGTTCTCAAGCAACTACAATCTCTGGTGATTATAGAAACTGGAATAAGTGGAAACATACCTGTGGAGATAGGTAATTTTGTGAAGCTTAGGAGGCTTGTTCTTTCTGAAAATCAACTGGAGGGTCAGATTCCAGCCATTGTAGGAACGCTTGAAGAGCTTCTTATATTTGACTTGAGCGGAAATAATTTGTCTGGGGAATTGCCTTTGAGTATTGGAGGTTTGAAATCTCTGTTGAAGCTGGATTTGAGCAGTAATAACTTCGAGGGAGAGATTCCGGAAGGGATTGGAAGGTTAAGAAATCTGACATTGTTAGACCTTGGAAAAAACAAGTTTTCAGGGCAGCTACCGACGTCGCTTCAAGACATGGTTTCGTTGAAAGAAATGGTGATTTCCAACAATCCAATGGGTTGTGATTTGATGAAAATTCGATGGAAAAATATGCAAAATCTGGAAATTATGGATCTTTCAAACATGGGTCTAACCGGGGAAATTCCTGAATCCATTGCAGAATTGAGGACGATAAGATATCTGGGTTTTAACAATAATTATCTTTCAGGAACACCCTCTTCGTCACTTTCATCTTTGCCTTCAATTGGAACTCTTTATCTTTACGGAAATAATTTTACAGGAGAACTAGAGTTTTCAGAGGCATTTTATCGAACACTTGGTAAGCGGTTTGGAGCTTGGAATAATCCCAAGCTTTGTTACAGAGATGAACTCGTTTTGGAAGGAAATTATCCTCACGGAGTAAAACCCTGCGGGGGAGAAAAGAAAGGCAGCCCCACTTCCCCTTACGTTTCTCCTGAAAATCCTCCATATTTCTTCTCAGTAACAGTACCCATTATCTCTCTCCTCCTCTCTATAAAAATAGACGCGAAGGAGCTCCATGAAGTTAAAAAATGGCTGCTTCTAACGATGGGATTATCCAAAGCTCTCTTGCTTTCTCTTCTTCTTTCTTTAAATTGCTTCAGCGGAAGCAGCACGGAATTTGAAGTGGGTGATGAAGATGGGTGGGTCGTTCCTCAAGCAAAGAGTGACAGCCAAAAGTACAACCAGTGGGCCTCCAGAAACAGGTTCAAGGTTGACGACACAGTTCACTTCAAGTACGAGAAAGACTCAGTTTTGGTAGTGACAGAGGACGAATATAACCAGTGTCATTCTTCTCACCCAACCTTCTTCTCCAACAATGGCGATTCAGTGTTCAAACTGGACAGACCAGGGCTCTTCTTCTTCATCAGCGGAGTTTCCGGCCACTGCGAGAGGGGCCAGAAGATGATCATCAAAGTGCTGGATGTAGGCCGCAGCTTCTCCCGTCCCAGCCAATCAAACTGA 1890 42.06 MKISESVHLLLILVCLSVFCRGQTEPSMSAMEKEEQEALYSTVQGFVGKWWNGSDLYPDPCGWTPIQVFINFLLFSITTPFVQCSIGFHVQGVSCDLYGGFWYVSELKIGSTFENSLQCNESAIFTHHLFKLKYLRSLSFFNCFLSSSQNPVAIPSSNWEKFTDTLESLKFRSNQGLVGSIPTSLGVLKQLQSLVIIETGISGNIPVEIGNFVKLRRLVLSENQLEGQIPAIVGTLEELLIFDLSGNNLSGELPLSIGGLKSLLKLDLSSNNFEGEIPEGIGRLRNLTLLDLGKNKFSGQLPTSLQDMVSLKEMVISNNPMGCDLMKIRWKNMQNLEIMDLSNMGLTGEIPESIAELRTIRYLGFNNNYLSGTPSSSLSSLPSIGTLYLYGNNFTGELEFSEAFYRTLGKRFGAWNNPKLCYRDELVLEGNYPHGVKPCGGEKKGSPTSPYVSPENPPYFFSVTVPIISLLLSIKIDAKELHEVKKWLLLTMGLSKALLLSLLLSLNCFSGSSTEFEVGDEDGWVVPQAKSDSQKYNQWASRNRFKVDDTVHFKYEKDSVLVVTEDEYNQCHSSHPTFFSNNGDSVFKLDRPGLFFFISGVSGHCERGQKMIIKVLDVGRSFSRPSQSN 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7041790 7044748 - Bda027687.1 Bda14g00907 20958

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00907 629 Pfam Plastocyanin-like domain 529 609 IPR003245 GO:0009055
Bda14g00907 629 PANTHER RECEPTOR-LIKE PROTEIN 14 90 439 - -
Bda14g00907 629 Gene3D - 513 619 IPR008972 -
Bda14g00907 629 PANTHER RECEPTOR-LIKE PROTEIN 14 12 68 - -
Bda14g00907 629 CDD OsENODL1_like 514 616 IPR041846 -
Bda14g00907 629 SUPERFAMILY L domain-like 51 399 - -
Bda14g00907 629 SUPERFAMILY Cupredoxins 513 616 IPR008972 -
Bda14g00907 629 ProSiteProfiles Phytocyanin domain profile. 514 617 IPR003245 GO:0009055
Bda14g00907 629 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 12 68 - -
Bda14g00907 629 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 90 439 - -
Bda14g00907 629 Gene3D Ribonuclease Inhibitor 104 444 IPR032675 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00907 - - - qlo:115963140 516.924
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00907 Bda-Chr14:7041790 Bda15g01011 Bda-Chr15:18835572 1.53E-72 dispersed
Bda06g00263 Bda-Chr6:4523897 Bda14g00907 Bda-Chr14:7041790 5.71E-43 transposed
Bda07g00926 Bda-Chr7:10867299 Bda14g00907 Bda-Chr14:7041790 1.24E-53 transposed
Bda09g00860 Bda-Chr9:21054413 Bda14g00907 Bda-Chr14:7041790 6.26E-78 transposed
Bda12g00590 Bda-Chr12:15613676 Bda14g00907 Bda-Chr14:7041790 3.04E-73 transposed
Bda13g01640 Bda-Chr13:39873479 Bda14g00907 Bda-Chr14:7041790 2.64E-38 transposed
Bda14g00907 Bda-Chr14:7041790 Bda07g01522 Bda-Chr7:28304583 1.79E-72 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g376 . . . . . . . . Cmo13g01087 . . . . . . Cpe20g00102 . . . . . . . . . . . . . . . . . . . Lsi02g00157 Csa01g00642 Chy12g01460 Cme12g01900 . . . Bda14g00907 . Bpe15g00551 Bma03g00881 . Sed08g2159 . . Cma13g01046 Cma18g00027 Car13g00879 . . . Bhi08g01036 Tan05g2299 Cmetu12g1793 Lac10g0209 Hepe07g2420 . . Cla04g01116 Cam04g1169 Cec01g1680 Cco01g1728 Clacu04g1197 Cmu04g1176 Cre01g1475 . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda09g00514 . 8 146 Phytocyanin Superfamily AT5G53870 55.4 4.9e-40 162.2
Bda09g00860 . 1 142 Phytocyanin Superfamily AT1G48940 60.0 5.5e-45 177.6
Bda14g00907 . 492 618 Phytocyanin Superfamily AT1G48940 63.3 1.0e-43 173.3
Bda12g00590 CCT 1 142 Phytocyanin Superfamily AT1G48940 58.6 1.4e-43 172.9
Bda09g00514 . 5 140 Phytocyanin Superfamily AT4G27520 53.6 1.7e-37 153.7
Bda01g01015 . 12 172 Phytocyanin Superfamily AT2G25060 52.5 4.5e-42 167.9
Bda01g01224 . 41 191 Phytocyanin Superfamily AT5G15350 54.6 1.3e-46 183.0
Bda13g01701 . 32 181 Phytocyanin Superfamily AT5G15350 53.0 1.3e-43 172.9
Bda01g01015 . 10 176 Phytocyanin Superfamily AT4G31840 51.5 8.8e-43 170.2
Bda09g00860 . 21 131 Phytocyanin Superfamily AT3G18590 64.9 1.5e-40 162.9
Bda14g00907 . 512 621 Phytocyanin Superfamily AT3G18590 66.4 1.9e-40 162.5
Bda12g00590 CCT 21 131 Phytocyanin Superfamily AT3G18590 63.1 3.7e-39 158.3
Bda09g00514 . 8 146 Phytocyanin Superfamily AT5G53870 55.4 4.9e-40 162.2
Bda09g00514 . 5 140 Phytocyanin Superfamily AT4G27520 53.6 1.7e-37 153.7
Bda09g00860 . 21 131 Phytocyanin Superfamily AT3G18590 64.9 1.5e-40 162.9
Bda14g00907 . 512 621 Phytocyanin Superfamily AT3G18590 66.4 1.9e-40 162.5
Bda12g00590 CCT 21 131 Phytocyanin Superfamily AT3G18590 63.1 3.7e-39 158.3
Bda09g00860 . 1 142 Phytocyanin Superfamily AT1G48940 60.0 5.5e-45 177.6
Bda14g00907 . 492 618 Phytocyanin Superfamily AT1G48940 63.3 1.0e-43 173.3
Bda12g00590 CCT 1 142 Phytocyanin Superfamily AT1G48940 58.6 1.4e-43 172.9
Bda01g01015 . 24 177 Phytocyanin Superfamily AT5G25090 53.4 4.7e-39 157.9
Bda01g01015 . 12 172 Phytocyanin Superfamily AT2G25060 52.5 4.5e-42 167.9
Bda01g01015 . 10 176 Phytocyanin Superfamily AT4G31840 51.5 8.8e-43 170.2
Bda01g01224 . 41 191 Phytocyanin Superfamily AT5G15350 54.6 1.3e-46 183.0
Bda13g01701 . 32 181 Phytocyanin Superfamily AT5G15350 53.0 1.3e-43 172.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000973 5 4 1 1 2 2 4 2 2 3 3 2 3 3 3 3 2 2 5 3 2 4 3 3 2 3 2 3 2 3 82
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00907 Bda_Chr14 FPKM 4.736842 3.589534 7.908801 8.475758 8.787933 9.386851 9.12718 10.630385 9.064508