Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00912 ATGGCGAAGCCTCGCAAACCAAAGACCAGCGGGGATATGAAGCCTGATAACTCCGTCGCTGTTGTTCGTCACCAGAAGCTTTGCCTCTCGATTGACATTGATAAACGTCGTATTTTCGGGTTCACTGAGTTGGAAATTGCGGTTCCAGACATTGGGATTGTTGGTTTGTATGCCGAGAATCTGGAGATTGAGAGTATTTCAGTGGATGGCGAGCCGGCCGAATTTGAGTATTATCCCCTTCATCAGCATGTGGAAAAGGACTCCAGGTGGAATTCAGTGTCATCTCCTAGCTCCGCTGCTGATGCTGCTGGCTCACTATATTTTTCATCTCTGGAAAGAGAATTGATTCCAAATTTACTTATAAACTGTTGCAAGGCTTACAAGAATGGAAGCGAGCAGCAGGAGCAACTGCTGGTGGAGAATGGGGAGCAAAACGCAAATGAGGCAAAGCAGAATGTAAGGTTGGTGCACATAGACTACTGGGTAGAAAAAGCAAAGGCAGGAATTCATTTCAACAAGAATTCAGTACATACTGATAATCAGATAAGGCGTGCTCGATGCTGGTTCCCTTGCATGGATGATGGCTTACAAAGATGCTGCTATGATATGGAGTTCACAGTTGCCCACGGATTTGTGGCTGTCAGTACAGGAACCTTGCTATGTCAGGTTTTGGGCAGGGATGTTCCTCCTTCCAAAACTTATGTCTATCGGTTGGACATTCCTGTTAATGCCCAGTTTATATCTTTGGCAGTTGGTCCTTTTGAAATTCTCCCTGATCACCAAATTACCTGCATGTCACACATGTGTATGCCCAATAATTTATCAAAGCTTCGTAATACAGTGGAATTTTTCCATAATGCATTCAGCTTATATAAAGATTACCTTTCGGCAGACTTTCCTTTTGAGTCATACAAACAAGTTTTCATAGAACCTGAGATGACAGTCTCATCATCAAGTTTTGGAGCTTCCATGTGCATATTTAGTTCTCACCATTTGTTTGATGAGAAAGTTATTGATAAGACAATAGAGACATGGATCAAACTCGCCTCTGCCTTTGCAAGACAGTGGTTTGGTATATATATTACACCCGAGTCTTCAAATGATGAATGGCTAGTGGACGGTCTTGCTTCTTTTCTAACAGATATGTTCATTGAGAAATACTTGGGAAATAATGAGGCGTGCTACCGAAGATACAAGGCAAATTCTGCAGTTTGCAAAGCAGATAGCATTGGTGCAACTGCCTTGAGTTCATCTTCTTCTTGTAAGGATTTGTATGGGACTCACTGTATTGGGATGTATGGAAAAATACGATCATGGAAAGCAATGGCGATTCTTAAAATGCTGGAAAAGCAAATGGGATTTGAGAATTTCCGCAAAGTAAATTCTCCTACTAAATCTCCTCATTTTTTGAATGGGACTCAGATTTTGCAGACTATAGTTTCTCGAGCTGAAGATACAACCCTTTCTTCAAAATCTCTCAGTACAAAGGAGTTCCGACAGTTTGCTAATAAAATTGGAAATCTTGAGCGTCCATTTTTAAAAGAATTCTTTCCTCGGTGGGTGGGATCATGTGGCTGTCCAGTGCTAAGAATGAGCTTTTCAAATAATAAGCGAAAGATTGAAATGGTAGTGTTACGGGAATCCACGGCACTGCTTGGTGCAAATGCATCAGATGTAGCTGCCAGCAAAGATTCTGAAAGCAGAAATGATACTGAGTGGCCAGGAATCATGACTATTCGTGTTTGTGAAATAGAAGGTCTGTATGACCATCCAGTTTTGCCATTAAATGGGGAATCTTCACAGTTTTTGGAAATACCATGCTATGCCAAACCTGGGGCTAAACGCCCCCAGAAGACTAAAAAGGGTACAAAACCTGATGGATCTGATGATAATGGTGATATGCCTGCACATAGTTCATTGGATGTACGGTTGAGCATGGAAACCCCTGTGTTGTGGTTGAGGGCAGACCCTGGAATGGAATATCTTTCTGAAATTCATTTTCATCAACCTGTTCAGATGTGGATTAATCAATTAGAGAAGGACAAAGATGTTGTTGCTCAAGCACAAGCGATTGCGACAATGCAGACATTACCACATTTACCATTTGCTGTTGTGAATGGTTTGAACAACTTCCTCATAGATTCCAAGGCCTTTTGGCGAGTCCGAATTGATGCGGCATTTGCAGTGGCTGATACAGCATCTGAGGATAGTGACACTGCTGGATTACACAACCTCATAAAATATTATAAAAGTCGGAGGTTTGATGCGAACACTGGACTGCCCAAGCCAAATGATTTCCGCAACTTTGCTGAATATTTTGTTCTTGAGGCTATCCCGCATGCTGTTGCTATGATTAGGGGTGCTAATAAGAAGAGCCCAAGAGAAGCTGTTGAATTTATTTTGCAACTCTTGAAGTATAATGACAACAATGGGAACTCTTACTCTGATGTATACTGGCTCGGAGCATTAGTCCAATCAATCGGCGAACTTGAGTTTGGGCAACAGAGTATTATATTTTTGGCATCACTTCTGAAGCGCATTGATAGGATTTTGCAATTTGAGAGACTGATGCCTAGCTACAATGGAATCTTGACAATTAGTTGTATTCAAACCTTGACGCAGATTGCACTCAAGCTGTCGGGATTTCTTCCTCTTGATCGTGTGTTTGAACTAATAAGACCTTATCGGAAATCCAATGCACTATGGCAAGTACGAATAGAAGCAAGCAAAGCACTCCTTGAACTTGAATTCCACTCCAAAGGCATTGATGGAGCAATATTGTCGTTTGGAAAATATGTGGAAGAGGAGACATCACGGAGAGGGCAGGTGAAACTGTCGACATATGCCATGCAGTTATGTCAGATGAGTCATGTACCAGATTCCAGCAATTTCATTCAGAGTGAAACTCTTGTGGCTTTGCTTCAATTACTTGAAAGCAATATAGCATTCAACAATGTCTATCTTCGACATTACTTGTTTTGCATTTTACAAGTTCTTGCAGGGAGGCCTCCGACACTCTATGGAGTACCCAGACATCATAGACCATTACAAGCGGGTGACACAGAAACTGGCAGTGAACAGAAGAAAATTTTTACAGCTCTTGTTTCTGAGACTAATCAACTAGAGATATCTGTTTTAGTTCCTAATCCACTGGAACAGCTTGATTTCTCAAGCATCCCGCCTGATGGTTCGGAAGGTCTGAAAGAAATGCTGGCTTTACCAGAAGGTCTGAAAGAAGTGCTGCCCTTGCCAGAAGCGTCTGTAGAAGCCCCAGATGTTCCAGAAGCTTCCAAGGAAGCCACAGTTTCTGTCAGCCAAGGACGGCGAAAACCAATTTTTAAGATAAAAGTAAGATCATCTACTTACGCCAGTGGAGCACAGGAGACTAACACTCGGGGCGGTAATCAAGAAATTGAACTTGGACAGAGCAGTTCTGTTTCAGTAGATGCACCCCAAAGAAATTTTACAGAGACAGTAAGTGTTAGCAATCAGAATCTCGAGGAAGATAACTCGTGTCATAATCATGGGTCCCGTATGACAGCCAGTATTGGGAGTGCTAAGATTCCAAGTGATGGTGATGAGCTTGGGAAGGAATTTCAGTGTACAGCTGATTCTAGCAAAGCCTTGGCATTACCCAATCCTGACAATCCTTCATCTTCTAGCATCATCCATGACAGCAACATAGACTTGGGTGCACAAAAGTATGCGAGTCTACAAACTCTTTCTACGGGAAAATATGATCTCGACGGTGGTTCTTTTGCCACAGTGGATTCTCCGCTGCGTGGGAAAAAAGAGAAGAAGAGAGACAAAGAAAAGAAGCGGAGTCGAGGAGAACATAAAGAACATCAACATCGGGATGATCCTGCATACTTGGAGCACAAACGCATGAAGAAGGAAAAGAAGCAGAAGAAGAAAGAGATGGCAAAACTGATGAAAAACGAGGCGAATCCATCTCTGACCCTTAAAAAGGAGGAACCCGAAATTACCTCATCCGTGGCGAATGTCCATGATAAACAAGAGAGGCCTGTAATAAAGTTGGTAGCTGTTCCACCGAAACCAAGCGAACCAAGTCGATCTAAAGCTATTGGAGCCGACGCTAGATCAGAGCCGTCATCACAAGGTACAGCTGCTGCTCCAAAAATTCGATTAAAAATAAAAACGAGGACGATTAATTAA 4176 42.36 MAKPRKPKTSGDMKPDNSVAVVRHQKLCLSIDIDKRRIFGFTELEIAVPDIGIVGLYAENLEIESISVDGEPAEFEYYPLHQHVEKDSRWNSVSSPSSAADAAGSLYFSSLERELIPNLLINCCKAYKNGSEQQEQLLVENGEQNANEAKQNVRLVHIDYWVEKAKAGIHFNKNSVHTDNQIRRARCWFPCMDDGLQRCCYDMEFTVAHGFVAVSTGTLLCQVLGRDVPPSKTYVYRLDIPVNAQFISLAVGPFEILPDHQITCMSHMCMPNNLSKLRNTVEFFHNAFSLYKDYLSADFPFESYKQVFIEPEMTVSSSSFGASMCIFSSHHLFDEKVIDKTIETWIKLASAFARQWFGIYITPESSNDEWLVDGLASFLTDMFIEKYLGNNEACYRRYKANSAVCKADSIGATALSSSSSCKDLYGTHCIGMYGKIRSWKAMAILKMLEKQMGFENFRKVNSPTKSPHFLNGTQILQTIVSRAEDTTLSSKSLSTKEFRQFANKIGNLERPFLKEFFPRWVGSCGCPVLRMSFSNNKRKIEMVVLRESTALLGANASDVAASKDSESRNDTEWPGIMTIRVCEIEGLYDHPVLPLNGESSQFLEIPCYAKPGAKRPQKTKKGTKPDGSDDNGDMPAHSSLDVRLSMETPVLWLRADPGMEYLSEIHFHQPVQMWINQLEKDKDVVAQAQAIATMQTLPHLPFAVVNGLNNFLIDSKAFWRVRIDAAFAVADTASEDSDTAGLHNLIKYYKSRRFDANTGLPKPNDFRNFAEYFVLEAIPHAVAMIRGANKKSPREAVEFILQLLKYNDNNGNSYSDVYWLGALVQSIGELEFGQQSIIFLASLLKRIDRILQFERLMPSYNGILTISCIQTLTQIALKLSGFLPLDRVFELIRPYRKSNALWQVRIEASKALLELEFHSKGIDGAILSFGKYVEEETSRRGQVKLSTYAMQLCQMSHVPDSSNFIQSETLVALLQLLESNIAFNNVYLRHYLFCILQVLAGRPPTLYGVPRHHRPLQAGDTETGSEQKKIFTALVSETNQLEISVLVPNPLEQLDFSSIPPDGSEGLKEMLALPEGLKEVLPLPEASVEAPDVPEASKEATVSVSQGRRKPIFKIKVRSSTYASGAQETNTRGGNQEIELGQSSSVSVDAPQRNFTETVSVSNQNLEEDNSCHNHGSRMTASIGSAKIPSDGDELGKEFQCTADSSKALALPNPDNPSSSSIIHDSNIDLGAQKYASLQTLSTGKYDLDGGSFATVDSPLRGKKEKKRDKEKKRSRGEHKEHQHRDDPAYLEHKRMKKEKKQKKKEMAKLMKNEANPSLTLKKEEPEITSSVANVHDKQERPVIKLVAVPPKPSEPSRSKAIGADARSEPSSQGTAAAPKIRLKIKTRTIN 1391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7085406 7113643 + Bda027692.1 Bda14g00912 20963

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00912 1391 MobiDBLite consensus disorder prediction 1259 1295 - -
Bda14g00912 1391 Coils Coil 1293 1316 - -
Bda14g00912 1391 MobiDBLite consensus disorder prediction 611 639 - -
Bda14g00912 1391 Gene3D Neutral Protease Domain 2 260 525 IPR027268 -
Bda14g00912 1391 SUPERFAMILY ARM repeat 676 1001 IPR016024 -
Bda14g00912 1391 MobiDBLite consensus disorder prediction 1246 1391 - -
Bda14g00912 1391 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 18 1314 IPR037813 GO:0005669
Bda14g00912 1391 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 253 IPR042097 -
Bda14g00912 1391 Gene3D tricorn interacting facor f3 domain 21 252 IPR042097 -
Bda14g00912 1391 Coils Coil 132 152 - -
Bda14g00912 1391 MobiDBLite consensus disorder prediction 1163 1184 - -
Bda14g00912 1391 CDD M1_like_TAF2 24 521 - -
Bda14g00912 1391 MobiDBLite consensus disorder prediction 1163 1196 - -
Bda14g00912 1391 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 266 530 - -
Bda14g00912 1391 Pfam Peptidase family M1 domain 282 459 IPR014782 GO:0008237|GO:0008270
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00912 K03128 TAF2; transcription initiation factor TFIID subunit 2 - csv:101210662 1687.55
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g367 . . . . . . . . Cmo13g01082 . . . . . . Cpe20g00107 . . . . . . . . . . . . . . . Cone2ag0646 . . . Lsi02g00164 Csa01g00648 Chy12g01454 Cme12g01894 . . . Bda14g00912 . Bpe15g00546 Bma03g00887 . . . . Cma13g01041 . Car13g00873 . . . Bhi08g01209 . . Lac10g0216 . . . Cla04g01110 Cam04g1162 Cec01g1673 Cco01g1719 Clacu04g1190 Cmu04g1170 Cre01g1467 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010321 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00912 Bda_Chr14 FPKM 2.49392 3.12275 0.0 0.0 0.0 0.0 0.0 1.529388 1.131549