Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00960 ATGTTATCAAGGTTGATGAACTTTTTGAGGGCCTGTTGGAGGCCATCCTCCGACCCTTTTCTCCAAAATGGCTCAGACGCAAGCGGCCGGCAAGATGGGTTACTTTGGTACAAGGATATTGGGCAGCACACCGGCGGTGAATTTTCAATGGCGGTGGTTCAGGCCAATAATTTGTTGGAGGATCAGAGCCAAATTGAGTCCGGTGCTTTAAGCTCGCACGACTCTGGGCCTTACGGCACCTTCATTGGTGTCTACGATGGTCACGGAGGACCCGAGACATCTCGTTTCGTTTGCGATCATTTATTCCACCATCTCAAAAGATTTGCATCAGAGCAACTATCGATGTCGGTCGAGGTGATCAGGAAAGCATATCAAGCAACCGAGGAGGGGTTTTCATCCGTTGTTGCCAAACAATGGCCGATGAAGCCCCAAATAGCTGCAGTAGGATCTTGCTGCTTGGTTGGTGTGATTTGTGGAGGCACACTTTACATTGCGAACCTTGGAGATTCACGGGCTGTTCTCGGGAGGCTTATGAGGTCTACAGGGGAGGCTCTTGCCATTCCCCTCTCAGCAGAACATAATGTCGGAATCGAATCCGTTAGGCAGGAGATGCACTCTTTGCACCCCGATGACTCCCATATTGTTGTTCTAAAGCACAATGTATGGCGAGTAAAAGGCTTGATACAGATATCCAGATCTATTGGTGATGTATATTTGAAAAGGCCTGAATACAATAGAGAGCCTCTTTACGCTAAGTTTCGCCTCCGAGAACCCTTCAGGAGGCCAATTTTGAGTTCCGAACCGTCAATTTCTGTACACGAGCTTCAGGCACATGATCAATTTCTGATTTTTGCTTCCGATGGGCTATGGGAGCATCTTACCAATCAGGAAGCCGTCGATATTGTCCAAAATCATCCTCGCACTGGAATTGCTCGGAGGCTCGTAAAAACCGTATTGCAGGAAGCAGCTAAGAAAAGAGAGATGCGATATTCCGATCTAAAGAAAATCGACCGTGGTGTCCGCCGCCATTTTCATGACGATATTACAGTGATCGTCGTATTTCTTGACTCAAATCTTGTGAGCAGAGCCACCTCAGTTAGAGGTCCCATCGTGTCGTTAAGAGGTGGAGGAATTAATGTGCCTGCAAAATCTCTTGCTCCTTGTGCCACTCCAAACCAGCTCAGATCAACT 1191 47.77 MLSRLMNFLRACWRPSSDPFLQNGSDASGRQDGLLWYKDIGQHTGGEFSMAVVQANNLLEDQSQIESGALSSHDSGPYGTFIGVYDGHGGPETSRFVCDHLFHHLKRFASEQLSMSVEVIRKAYQATEEGFSSVVAKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLMRSTGEALAIPLSAEHNVGIESVRQEMHSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKRPEYNREPLYAKFRLREPFRRPILSSEPSISVHELQAHDQFLIFASDGLWEHLTNQEAVDIVQNHPRTGIARRLVKTVLQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRATSVRGPIVSLRGGGINVPAKSLAPCATPNQLRST 397
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 7730172 7731917 - Bda033953 Bda14g00960 21011
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00960 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Bda14g00960 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
Bda14g00960 397 SMART PP2C_4 41 353 IPR001932 -
Bda14g00960 397 Pfam Protein phosphatase 2C 72 323 IPR001932 -
Bda14g00960 397 Gene3D - 38 365 IPR036457 -
Bda14g00960 397 CDD PP2Cc 48 355 IPR001932 -
Bda14g00960 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Bda14g00960 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Bda14g00960 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00331 Bda-Chr8:3402194 Bda14g00960 Bda-Chr14:7730172 2.48E-155 dispersed
Bda08g00984 Bda-Chr8:19880455 Bda14g00960 Bda-Chr14:7730172 5.40E-180 dispersed
Bda14g00624 Bda-Chr14:4685272 Bda14g00960 Bda-Chr14:7730172 0 dispersed
Bda14g00960 Bda-Chr14:7730172 Bda15g01025 Bda-Chr15:19217571 1.23E-33 dispersed
Bda06g01210 Bda-Chr6:41936737 Bda14g00960 Bda-Chr14:7730172 3.47E-138 transposed
Bda14g00978 Bda-Chr14:7906517 Bda14g00960 Bda-Chr14:7730172 0 transposed
Bda11g01820 Bda-Chr11:53378879 Bda14g00960 Bda-Chr14:7730172 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00960 K01102 - nnu:104603663 691.419