Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g00960 | ATGTTATCAAGGTTGATGAACTTTTTGAGGGCCTGTTGGAGGCCATCCTCCGACCCTTTTCTCCAAAATGGCTCAGACGCAAGCGGCCGGCAAGATGGGTTACTTTGGTACAAGGATATTGGGCAGCACACCGGCGGTGAATTTTCAATGGCGGTGGTTCAGGCCAATAATTTGTTGGAGGATCAGAGCCAAATTGAGTCCGGTGCTTTAAGCTCGCACGACTCTGGGCCTTACGGCACCTTCATTGGTGTCTACGATGGTCACGGAGGACCCGAGACATCTCGTTTCGTTTGCGATCATTTATTCCACCATCTCAAAAGATTTGCATCAGAGCAACTATCGATGTCGGTCGAGGTGATCAGGAAAGCATATCAAGCAACCGAGGAGGGGTTTTCATCCGTTGTTGCCAAACAATGGCCGATGAAGCCCCAAATAGCTGCAGTAGGATCTTGCTGCTTGGTTGGTGTGATTTGTGGAGGCACACTTTACATTGCGAACCTTGGAGATTCACGGGCTGTTCTCGGGAGGCTTATGAGGTCTACAGGGGAGGCTCTTGCCATTCCCCTCTCAGCAGAACATAATGTCGGAATCGAATCCGTTAGGCAGGAGATGCACTCTTTGCACCCCGATGACTCCCATATTGTTGTTCTAAAGCACAATGTATGGCGAGTAAAAGGCTTGATACAGATATCCAGATCTATTGGTGATGTATATTTGAAAAGGCCTGAATACAATAGAGAGCCTCTTTACGCTAAGTTTCGCCTCCGAGAACCCTTCAGGAGGCCAATTTTGAGTTCCGAACCGTCAATTTCTGTACACGAGCTTCAGGCACATGATCAATTTCTGATTTTTGCTTCCGATGGGCTATGGGAGCATCTTACCAATCAGGAAGCCGTCGATATTGTCCAAAATCATCCTCGCACTGGAATTGCTCGGAGGCTCGTAAAAACCGTATTGCAGGAAGCAGCTAAGAAAAGAGAGATGCGATATTCCGATCTAAAGAAAATCGACCGTGGTGTCCGCCGCCATTTTCATGACGATATTACAGTGATCGTCGTATTTCTTGACTCAAATCTTGTGAGCAGAGCCACCTCAGTTAGAGGTCCCATCGTGTCGTTAAGAGGTGGAGGAATTAATGTGCCTGCAAAATCTCTTGCTCCTTGTGCCACTCCAAACCAGCTCAGATCAACT | 1191 | 47.77 | MLSRLMNFLRACWRPSSDPFLQNGSDASGRQDGLLWYKDIGQHTGGEFSMAVVQANNLLEDQSQIESGALSSHDSGPYGTFIGVYDGHGGPETSRFVCDHLFHHLKRFASEQLSMSVEVIRKAYQATEEGFSSVVAKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLMRSTGEALAIPLSAEHNVGIESVRQEMHSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKRPEYNREPLYAKFRLREPFRRPILSSEPSISVHELQAHDQFLIFASDGLWEHLTNQEAVDIVQNHPRTGIARRLVKTVLQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRATSVRGPIVSLRGGGINVPAKSLAPCATPNQLRST | 397 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 7730172 | 7731917 | - | Bda033953 | Bda14g00960 | 21011 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g00960 | 397 | ProSitePatterns | PPM-type phosphatase domain signature. | 81 | 89 | IPR000222 | GO:0043169 | |
| Bda14g00960 | 397 | PANTHER | ALPHABET, ISOFORM E-RELATED | 5 | 386 | - | - | |
| Bda14g00960 | 397 | SMART | PP2C_4 | 41 | 353 | IPR001932 | - | |
| Bda14g00960 | 397 | Pfam | Protein phosphatase 2C | 72 | 323 | IPR001932 | - | |
| Bda14g00960 | 397 | Gene3D | - | 38 | 365 | IPR036457 | - | |
| Bda14g00960 | 397 | CDD | PP2Cc | 48 | 355 | IPR001932 | - | |
| Bda14g00960 | 397 | PANTHER | PROTEIN PHOSPHATASE 2C FAMILY PROTEIN | 5 | 386 | - | - | |
| Bda14g00960 | 397 | SUPERFAMILY | PP2C-like | 56 | 356 | IPR036457 | - | |
| Bda14g00960 | 397 | ProSiteProfiles | PPM-type phosphatase domain profile. | 47 | 355 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda08g00331 | Bda-Chr8:3402194 | Bda14g00960 | Bda-Chr14:7730172 | 2.48E-155 | dispersed | |
| Bda08g00984 | Bda-Chr8:19880455 | Bda14g00960 | Bda-Chr14:7730172 | 5.40E-180 | dispersed | |
| Bda14g00624 | Bda-Chr14:4685272 | Bda14g00960 | Bda-Chr14:7730172 | 0 | dispersed | |
| Bda14g00960 | Bda-Chr14:7730172 | Bda15g01025 | Bda-Chr15:19217571 | 1.23E-33 | dispersed | |
| Bda06g01210 | Bda-Chr6:41936737 | Bda14g00960 | Bda-Chr14:7730172 | 3.47E-138 | transposed | |
| Bda14g00978 | Bda-Chr14:7906517 | Bda14g00960 | Bda-Chr14:7730172 | 0 | transposed | |
| Bda11g01820 | Bda-Chr11:53378879 | Bda14g00960 | Bda-Chr14:7730172 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g00960 | K01102 | - | nnu:104603663 | 691.419 |