Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00969 ATGTCTTATCCTAACCCCAATAACAGAAACTCTCTATATCCTCAAGTTATTCAAACAAATCCCGATGCCCCTCCACCTCGCATCTCTCATTCCGATCTCAATCCGCCTTCTTCTTCTTCTTCTAACCTTTATCCCACCATCGACATGAAAGATCTCGTTGAGAATCTGTTCCCGGACCGGGATGATTGTCACAACCCTGATCTCATTCCTCCTTCTGCTCCTCCTGTAGCGACGGAGGAGGTTCTTTTCAAAATCTCTGGGGCCATTCTTAATCTCATTGACAGGAATTATAGTGTCGAGCTCGCTTGTGGTGATTTTTCCATTGTCCTTCTACGACAGGGCGAAAATGTGATTGCAGTGCTCGCTCGGGTCGCTGATGAAATCCAATGGCCTTTGACAAAGGATGAAGTGGCCGTTAAACTCGACGAATCACATTACTTCTTCTCTCTTCGCGCTCCGAAAAAGGAAGATTCCAGTTCCGATTCCGATTCGAGCGACGAGGAGGGGGGAAGAAGGAACGACCAGGGCTCTGAAAACATGTTGAATTACGGGCTAACGATCGCATCAAAAGGGAAAGAGAAATCATTGAAGGAATTAGATGGAATTTTGAGTCAATATAGTAGCTTCGCGGTACAGAAGGTGTCCGATAAAGCGAAGAAGGGAGAAGCACTTGATGTGTCTCTGGCAAAGGAGATGTCTCCGGCGGATCTGAAATCGGAGAAGAAGAAGGAACTAATGGAGGGAAAATGCGCGGCGTACTGGACGACATTGGCTCCAAATGTGGAGGATTACAGTGGGACAGCTGCAAAGTTGATCGCCGGTGGTACAGGTCAAGTGATTAAAGGGATTCTCTGGTGTGGCGACGTGACTGTGGAGAGGTTGAAATGGGGTAATGAGGTAATGAAGAAGAGGATGGGCCCTAAATCTGAAGTCGAAATCGACCCTGAAACCTTGAAGAGAATCAAAAGGGTTAAAAGGGTAACAAAAATGACAGAGAAAGTAGCGAATGGAGTGCTGTCTGGAGTTATCAAAGTTTCTGGATTTTTCACAAGCTCAGTGGCGAATTCCAAAGCAGGCAAGAAATTCTTCGGCCTCCTCCCTGGAGAAATTGTGCTTGCTTCTCTGGATGGATTTAGTAAAGTTTGTGATGCTGTTGAAGTGGCCGGAAAAAATGTCATGTCTGCATCCTCAACTGTAACCACTGAGCTCGTCTCCCACAGGTATGGGGAGAAAGCTAGCCACGCAACAAATGAAGGTCTCGACGCAGCAGGTCACGCTATAGGGACGGCATGGGCTGCTTTCAAGATCCGAAAGGCCCTTGATCCCAAAAGCGTCGTCAAGCCTTCTACCCTTGCCAAATCTACCATCAAAGCAGGAGCAGCTGATTTGAAAGCTAAGAGATCCAACTGCATATTAAAAGCCTCCACCCAATTTCCTATCATACAGGCTCTCTGTGACACATATAAGCACATTTACAACAAAGCCTTTTATGCTAATACATGTTTTGTGATATTGGTCATGTTGGCAATTTTAATTGGACTTTTAACAATATTGACGTGGCATTTTACAAAGATCTACACTGCCGATTCCCTGAACAGCTTAGCATATGGTCTGCGACATGAGCTTCTACAACGTCCAATTCTAAAAATGTCGAGCATCTTGAATGCCACTTCTGAAATAACAACAGCCCAGGTTAAGCTCGCGGAGTACGTCATGAGAAAGTACGATAAGCCTGCAACTCAAGCACAGGAAGTTGAGTTGTATGAATCAATGAAGGCTGTAACTTGGGCTCTATTTGCAAGTGAAAAAGCTCTGGACGCCATCACTATCAACTACAGAAACGGTTTTGTACAGGCATTTCATAGAGATCATAGTAGCAATAATACATTCTATATTTACTCTGATCTCACCAATTATTCTATCAGTTCTACTGAGTCTTATAACCTGAGTAGACTGCCATTAGATCAAGGCTGGTCTGACCATCCAATTCACGGCAACCTTTCTGCAATTTGGTATCAGGAACCACTCGATCCTGTCAGTGGTGTAAAGATTGGAAAATCAAGGCCAATCCCTCCTGAGGATTTGATTAATATCGCTGGAATTTCGCAAGTGCCATATGGTGTGGCCTCATGGGATGTGACTGTCAGCAAGTATATGGACTCACCGTTACTTTCTGCTGCATTGCCTGTCTCGGACCCTTCAAATGAAAGTATTATTGCTGTTGTGGGTGTCACCACTGCACTTTCTGGCGTAGGCCAGCTGATGAAAGAGCTTGTTGAATATCATAGCGGGCATATTTATCTGACATCTCAAGAGGGTTACTTGCTAGCTACTTCAACCAATGCTCCACTTTTGACAAAAACTATCAAGGGTCCAAAGCTTACGATGGCAGTAGATTCTGAGGATGACTCGATACGATTAGGCGCTGAGTGGCTGCAGAAAACATACGGCAACAAGTTTCCTCCTAAACACGAGGTTCATGTAGAGAATGTCAAGCTTGGTCACCAGCAATATTACATCGACTCATTTTTCCTCAATTTAAAGAGACTTCCTATTGTTGGGGTTGTCATCATTCCAAGAAAATACATAATGGGGAAGGTTGATGAGAGAGCTTTCAAAACACTGGTTATCCTAATATCTGCATCATTATGTATCTTAGTCATTGGATGTGTCTGCATTTTCATTTTGACTAACGGAGTATCGAAGGAAATGAAACTAAGAGCAGAGTTGATAAGCCACCTGGATGCAAGAAGAAGGGCTGAGGCATCTAACAACTACAAAAGCCAATTTCTAGCAAATATGAGTCATGAGTTACGGACACCGATGGCTGCTGTGATTGGGCTGTTGGACATTCTTATGTGTGATGATTGCATAACAAATGAGCAGTATGCTACAGTTTCCCAGATTCGGAAATGCTCAACAGCTCTACTCCGGCTACTAAACAACATATTGGACTTGAGCAAGGTTGAATCTGGAAAATTAGTGCTGGAAGAAGCTGAGTTTGACCTGGGACGGGAACTTGAAGGTCTTGTCGATATGCTTTCTGTGCAGTGCATTAACCACAACGTGGAGACCGTGTTAGATCTTTCTGATGATATGCCGAGATTAGTTCGGGGAGACTCTGGTAGAGTTGTTCAAATATTTGCAAATCTGATCAGCAATTCTATCAAGTTTACGGCATCTGGTCACATTATTCTTCGCGGGTGGTGTGAGAGCTCAAGTTCTTTAAATGATGATGGGAAGTTTTCTTTTGATCAGAAGAGATCTCGGTTTCCCGGTCGGATGAAACTGAAGCAACAGGGACATCATATGAGAAGCACATACAAGAAGGAGAATAAAATGGCTCTCTGGTTTGAAGTTGATGACACAGGGTGTGGAATTGATCCGAGCAAATGGGAGTCTGTCTTTGAAAGCTTCGAGCAAGCTGACCCCTCAACGACCCGAACGCATGGAGGCACGGGTCTCGGACTATGCATTGTCCGAACTTTGGTGAAGCAGATGGGGGGAGAAATCAAGGTTGTGAAGAAGGATGGTCTAGGAACTCTAATGCAATTCTGCTTGGTCCTAAGCACACCAAAGGATGCCTTGGAGCAACGCTGTCAAATAGATTTTTCAGAGCACAATATGGTGTTATTGCTCGCCGTACGAGGGAGCATGAGTAGATTGATCATGTCCGAATGGCTTCATAAAATTGGAGTGCTAACTGTTCAAGCGTCCGAGTGGAATGGTTTAACAGTAATTCTTCAAGAACTATTCCAAGGAAGAAATCATGGATCTCTGACTGGATCTTTCGGAACTGAATCATTCGATATTCAAGACGTGAGAAGTCGCATCTTCATCACTTTTGTTGACGTAGGGCTACTTGACTTGAGCACGGATATATGGAAGGAACAACTTAACTTCCTGGATAAATACTCAGGAAAGACTAAGTTTTCGTGGATGTTAAATCACGATACCTCCAATGCGGTAAAGATGGAGCTTCGGAGGAAAGGGCACTTGTTAATGATCAACAGGCCTCTGTACAAGGCAAAAATGATTCAGATTCTGGAAGCTGTGATGAAGGAAAAAAATGATGAACAACCAAAAAGAAGTTTGAATTCTTTGCAGTCTTTATCGAAGGAAGGCAACTTCTACGAATGCCTTGAAATCGATTCCACTCATTTTGATAACTGCAGCTCGGACGATTCTGATGTACCGAAATCGGGCAGTTCGAACTCCAAATGTTCATTTCCAGTTGGAGAAAAACAAAGAGATGGGATTACAAAGCCATGCAGGTCAACTTATCAGAAAGGCAACAGTTTTCTAGTAGAATCAACTACTGTATATTCAAAGGAAAGTAGGCCCATTACATCAGCAAATTCTGAATGTCAAGAACAGAATTTAAAGAAAGAAGATGGCAATTTGAATTCTCGATGCGAGCCCTGTCAGAAATCTCTCGAAGGAGTACGAATTCTACTTGCAGAAGATACACCAGTTCTCCAAAGAGTGACGACTAAAATGCTAGAAAAAATGGGAGCTGAAGTTGTTGCGGTGGGAGATGGAGTGCAGGCAGTAGCCGCAATATCATCGATGGTAGAAGTCGAAGAAAATGGCAGGGAATCTTCGACCAAAGTTGGGGATGCGGATGCCACCCTATATGACTTGATCTTAATGGACTGTCAAGTAAGAACCCCAAACAATCTCCTTTTATTTACTATTCGGATTTCTTACAAAGTTGGGTTCTTGTGCTTGGAATTTCAGATGCCGAAAATGGATGGATACGAAGCGACGAGAGTAATCAGGAAATCGGAAGCCAGAAGCGGGTTTCACATTCCAATAGTTGCTTTGACTGCTCATGCCATGTCGTCAGACGAAGCAAAGTGCTTGGAAGTAGGGATGGATGCTTATTTGACAAAGCCAATCAACTATAAGTTGATGGTCTCCACCATTCTTTCTCTCACCAAAAGAACACCTTCACTTCCCTCCTCCCAAGGATGA 4977 43.7 MSYPNPNNRNSLYPQVIQTNPDAPPPRISHSDLNPPSSSSSNLYPTIDMKDLVENLFPDRDDCHNPDLIPPSAPPVATEEVLFKISGAILNLIDRNYSVELACGDFSIVLLRQGENVIAVLARVADEIQWPLTKDEVAVKLDESHYFFSLRAPKKEDSSSDSDSSDEEGGRRNDQGSENMLNYGLTIASKGKEKSLKELDGILSQYSSFAVQKVSDKAKKGEALDVSLAKEMSPADLKSEKKKELMEGKCAAYWTTLAPNVEDYSGTAAKLIAGGTGQVIKGILWCGDVTVERLKWGNEVMKKRMGPKSEVEIDPETLKRIKRVKRVTKMTEKVANGVLSGVIKVSGFFTSSVANSKAGKKFFGLLPGEIVLASLDGFSKVCDAVEVAGKNVMSASSTVTTELVSHRYGEKASHATNEGLDAAGHAIGTAWAAFKIRKALDPKSVVKPSTLAKSTIKAGAADLKAKRSNCILKASTQFPIIQALCDTYKHIYNKAFYANTCFVILVMLAILIGLLTILTWHFTKIYTADSLNSLAYGLRHELLQRPILKMSSILNATSEITTAQVKLAEYVMRKYDKPATQAQEVELYESMKAVTWALFASEKALDAITINYRNGFVQAFHRDHSSNNTFYIYSDLTNYSISSTESYNLSRLPLDQGWSDHPIHGNLSAIWYQEPLDPVSGVKIGKSRPIPPEDLINIAGISQVPYGVASWDVTVSKYMDSPLLSAALPVSDPSNESIIAVVGVTTALSGVGQLMKELVEYHSGHIYLTSQEGYLLATSTNAPLLTKTIKGPKLTMAVDSEDDSIRLGAEWLQKTYGNKFPPKHEVHVENVKLGHQQYYIDSFFLNLKRLPIVGVVIIPRKYIMGKVDERAFKTLVILISASLCILVIGCVCIFILTNGVSKEMKLRAELISHLDARRRAEASNNYKSQFLANMSHELRTPMAAVIGLLDILMCDDCITNEQYATVSQIRKCSTALLRLLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMLSVQCINHNVETVLDLSDDMPRLVRGDSGRVVQIFANLISNSIKFTASGHIILRGWCESSSSLNDDGKFSFDQKRSRFPGRMKLKQQGHHMRSTYKKENKMALWFEVDDTGCGIDPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVKQMGGEIKVVKKDGLGTLMQFCLVLSTPKDALEQRCQIDFSEHNMVLLLAVRGSMSRLIMSEWLHKIGVLTVQASEWNGLTVILQELFQGRNHGSLTGSFGTESFDIQDVRSRIFITFVDVGLLDLSTDIWKEQLNFLDKYSGKTKFSWMLNHDTSNAVKMELRRKGHLLMINRPLYKAKMIQILEAVMKEKNDEQPKRSLNSLQSLSKEGNFYECLEIDSTHFDNCSSDDSDVPKSGSSNSKCSFPVGEKQRDGITKPCRSTYQKGNSFLVESTTVYSKESRPITSANSECQEQNLKKEDGNLNSRCEPCQKSLEGVRILLAEDTPVLQRVTTKMLEKMGAEVVAVGDGVQAVAAISSMVEVEENGRESSTKVGDADATLYDLILMDCQVRTPNNLLLFTIRISYKVGFLCLEFQMPKMDGYEATRVIRKSEARSGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINYKLMVSTILSLTKRTPSLPSSQG 1658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7798251 7807089 - Bda027760.1 Bda14g00969 21020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00969 1658 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1039 1190 IPR003594 -
Bda14g00969 1658 PANTHER OSMOSENSOR HISTIDINE KINASE 1575 1648 - -
Bda14g00969 1658 PANTHER OSMOSENSOR HISTIDINE KINASE 502 1555 - -
Bda14g00969 1658 ProSiteProfiles Response regulatory domain profile. 1483 1647 IPR001789 GO:0000160
Bda14g00969 1658 Gene3D - 994 1194 IPR036890 -
Bda14g00969 1658 SMART REC_2 1482 1643 IPR001789 GO:0000160
Bda14g00969 1658 PRINTS Bacterial sensor protein C-terminal signature 1151 1169 IPR004358 GO:0016310|GO:0016772
Bda14g00969 1658 PRINTS Bacterial sensor protein C-terminal signature 1134 1144 IPR004358 GO:0016310|GO:0016772
Bda14g00969 1658 PRINTS Bacterial sensor protein C-terminal signature 1116 1130 IPR004358 GO:0016310|GO:0016772
Bda14g00969 1658 SMART HisKA_10 926 992 IPR003661 GO:0000155|GO:0007165
Bda14g00969 1658 MobiDBLite consensus disorder prediction 152 174 - -
Bda14g00969 1658 Pfam His Kinase A (phospho-acceptor) domain 927 992 IPR003661 GO:0000155|GO:0007165
Bda14g00969 1658 ProSiteProfiles Histidine kinase domain profile. 933 1191 IPR005467 -
Bda14g00969 1658 MobiDBLite consensus disorder prediction 1392 1414 - -
Bda14g00969 1658 Gene3D - 914 993 - -
Bda14g00969 1658 PANTHER TWO-COMPONENT HISTIDINE KINASE 1575 1648 - -
Bda14g00969 1658 PANTHER TWO-COMPONENT HISTIDINE KINASE 502 1555 - -
Bda14g00969 1658 SUPERFAMILY CheY-like 1480 1650 IPR011006 -
Bda14g00969 1658 CDD HisKA 927 988 IPR003661 GO:0000155|GO:0007165
Bda14g00969 1658 MobiDBLite consensus disorder prediction 1 25 - -
Bda14g00969 1658 MobiDBLite consensus disorder prediction 1395 1411 - -
Bda14g00969 1658 MobiDBLite consensus disorder prediction 152 178 - -
Bda14g00969 1658 Pfam Response regulator receiver domain 1571 1641 IPR001789 GO:0000160
Bda14g00969 1658 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 981 1187 IPR036890 -
Bda14g00969 1658 CDD REC_hyHK_CKI1_RcsC-like 1484 1643 - -
Bda14g00969 1658 Pfam Senescence domain 271 457 IPR009686 -
Bda14g00969 1658 Gene3D - 1462 1649 - -
Bda14g00969 1658 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 914 993 IPR036097 GO:0000155|GO:0007165
Bda14g00969 1658 SMART HKATPase_4 1039 1191 IPR003594 -
Bda14g00969 1658 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00685 Bda-Chr4:55591704 Bda14g00969 Bda-Chr14:7798251 5.59E-44 dispersed
Bda04g00686 Bda-Chr4:55608164 Bda14g00969 Bda-Chr14:7798251 5.24E-15 dispersed
Bda13g00598 Bda-Chr13:6969439 Bda14g00969 Bda-Chr14:7798251 2.02E-39 dispersed
Bda02g00415 Bda-Chr2:44761368 Bda14g00969 Bda-Chr14:7798251 7.22E-58 transposed
Bda08g00997 Bda-Chr8:20563441 Bda14g00969 Bda-Chr14:7798251 5.02E-14 transposed
Bda11g01830 Bda-Chr11:53535758 Bda14g00969 Bda-Chr14:7798251 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17080 PF06911 Senescence 1.20E-45 No_clan Bda TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00969 - - cmo:103490686 1625.14