Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00978 ATGTTATCAAGGTTGATGAGCTTTTTGAGGGCCTGTTGGAGGCCATCCTCCGACCCTTTTCTCCAAAATGGCTCAGACGCAAGCGGCCGGCAAGATGGGTTACTTTGGTACAAGGATATTGGGCAGCACACCGGCGGTGAATTTTCAATGGCGGTGGTTCAGGCCAATAATTTGTTGGAGGATCAGAGCCAAATTGAGTCCGGTGCTTTAAGCTCACACGACTCTGGCCCTTACGGCACCTTCATTGGTGTCTACGATGGTCACGGAGGACCCGAGACATCTCGTTTCGTTTGCGATCATTTATTCCACCATCTCAAAAGATTTGCATCAGAGCAACTATCGATGTCGGTCGAGGTGATCAGGAAAGCATATCAAGCAACCGAGGAGGGGTTTTCATCCGTTGTTGCCAAACAATGGCCGATGAAGCCCCAAATAGCTGCAGTAGGATCTTGCTGCTTGGTTGGTGTGATTTGTGGAGGCACACTTTACATTGCGAACCTTGGAGATTCACGGGCTGTTCTCGGGAGGCTTATGAGGTCTACGGGGGAAGTTCTTGCCATTCCCCTCTCAGCAGAACATAATGTCGGAATCGAATCCGTTAGGCAGGAGATGCACTCTTTGCACCCCGATGACTCCCATATTGTTGTTCTAAAGCACAATGTATGGCGAGTAAAAGGCTTGATACAGATATCCAGATCTATTGGTGATGTATATTTGAAAAGGCCTGAATACAATAGGGAGCCTCTTTACGCTAAGTTTCGCCTCCGAGAACCCTTCAGGAGGCCAATTTTGAGTTCCGAACCGTCAATTTCTGTACACGAGCTTCAGGCACATGATCAATTTCTGATTTTTGCTTCCGATGGCCTATGGGAGCATCTTACCAATCAGGAAGCCGTCGATATTGTCCAAAATCATCCTCGCACTGGAATTGCTCGGAGGCTCGTAAAAACCGTATTGCAGGAAGCAGCTAAGAAAAGGGAGATGCGATATTCCGATCTAAAGAAAATCGACCGTGGTGTCCGCCGCCATTTTCATGACGATATTACGGTGATCGTTGTATTTCTTGACTCAAATCTTGTGAGCAGAGCCAGCTCAGTTAGAGGTCCCATCGTGTCGTTAAGAGGTGGAGGAATTAATGTGCCTGCAAAATCTCTTGCTCCTTGTGCCACTCCAAACCAGCTCAGATCAACTTGA 1194 47.82 MLSRLMSFLRACWRPSSDPFLQNGSDASGRQDGLLWYKDIGQHTGGEFSMAVVQANNLLEDQSQIESGALSSHDSGPYGTFIGVYDGHGGPETSRFVCDHLFHHLKRFASEQLSMSVEVIRKAYQATEEGFSSVVAKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLMRSTGEVLAIPLSAEHNVGIESVRQEMHSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKRPEYNREPLYAKFRLREPFRRPILSSEPSISVHELQAHDQFLIFASDGLWEHLTNQEAVDIVQNHPRTGIARRLVKTVLQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSVRGPIVSLRGGGINVPAKSLAPCATPNQLRST 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7906517 7908265 - Bda027773.1 Bda14g00978 21029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00978 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Bda14g00978 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Bda14g00978 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Bda14g00978 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
Bda14g00978 397 Pfam Protein phosphatase 2C 72 323 IPR001932 -
Bda14g00978 397 CDD PP2Cc 48 355 IPR001932 -
Bda14g00978 397 SMART PP2C_4 41 353 IPR001932 -
Bda14g00978 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Bda14g00978 397 Gene3D - 38 365 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01210 Bda-Chr6:41936737 Bda14g00978 Bda-Chr14:7906517 6.27E-139 dispersed
Bda11g01820 Bda-Chr11:53378879 Bda14g00978 Bda-Chr14:7906517 0 dispersed
Bda14g00327 Bda-Chr14:2222047 Bda14g00978 Bda-Chr14:7906517 0 dispersed
Bda14g00978 Bda-Chr14:7906517 Bda15g01025 Bda-Chr15:19217571 1.36E-33 dispersed
Bda14g00978 Bda-Chr14:7906517 Bda14g00960 Bda-Chr14:7730172 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00978 K01102 - nnu:104603663 692.189