Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00980 ATGCTGTCAAATGCAGGGACGGCGGAAATCTCAACCACTGGATTTATGCTCCGCCCTGGCGAGGCAAACACCCTTACTGTTCCGAACTCCTGGTCTGGCCGATTATGGGGTCGGACCAATTGTTCTGAGGACACCTCCGGAAAGTTCTCTTGCATAACTGGAGACTGTGGCTCCAGTACAGTAGAATGCAAAGGCTCAGGCGCTGCCCCGCCGGTCACTCTTGGAGAGTTCACTCTGAACGGCTATGACGAGCTCGATTTCTACGATGTTAGCCTCGTGGATGGCTACAATCTTCCGATGTTGATCGCGCCAGTTGATGGAACTGGTAACTGTACGAGCACTGGGTGCTTGGCTGAGTTGAACGGCGGTTGTCCGGCGGAGCTGAGAATGATGGGTGCTGACGAGAGTTCGACAGTGGCGTGTAAGAGCGCTTGCATGGCTTTTGGTGAGCCCCAGTACTGCTGCACCGGTGCTTATGCAAATCCAAATACGTGCAAGCCCAGCTATTACTCCATGCTTTTCAAGAATGTGTGTCCTTTGGCTTATAGCTACGCTTTCGACGACGGAACAAGCACTTTCACCTGTGGATCGGCTAACTATGTTATCACTTTCTGCCCCTCCATAACAACCAGGTTTTGTTATTTCTCCCCCATCATCTTCACCGTCTTTGAACTTCTTTGGTTTTTCTTTTCAGGAGCTTCAGGAGCTACCTTCACATTTGTGAACAGGTGCGATTTTACTGTATGGCCGGGAATTCTGGGTAGTCCGAAACTAGATAGTACAGGCTTTGAGCTTCAAAAGGGTCGCTCTCGCTCCTTCCAAGCTCCGACTGGCTGGTCAGGCAGGTTCTGGGGTCGAACCACCTGCAACTTCGACGCCTCTGGCCGCGGCGTCTGCGCTACCGGAGACTGTGGCTCCGGCGAGGTTGAGTGTAACGGCGCCAGCGCTACTCCTCCAGCGACACTGGCTGAGTTTACACTCGGCTCCGGATCGCAGGATTTCTACGACGTTAGTCTCGTCGACGGCTATAACCTGCCTATGATCGTCGAAGGAACCGGCGGGTCGGGTCCGTGTGAAAAGACGGGTTGCGTATCAGACCTGAACCGGCAATGTCCGACGGAATTGAGAGCGGAAGGTGGCGGGGCATGTAGAAGTGCGTGCGACGCATTTGGGAAGCCGGAGTATTGTTGCAGCGGCGCGTATAATACACCAGCCGTTTGTAAACCTTCAATGTATTCGCAGATGTTCAAATCCGCCTGCCCAAAATCGTATAGCTACGCTTACGACGATGCCACCAGCACATTTACCTGCACCGGAGCAGATTATACGATCACATTTTGTCCTTCTTTTCCAAGGTAA 1359 52.83 MLSNAGTAEISTTGFMLRPGEANTLTVPNSWSGRLWGRTNCSEDTSGKFSCITGDCGSSTVECKGSGAAPPVTLGEFTLNGYDELDFYDVSLVDGYNLPMLIAPVDGTGNCTSTGCLAELNGGCPAELRMMGADESSTVACKSACMAFGEPQYCCTGAYANPNTCKPSYYSMLFKNVCPLAYSYAFDDGTSTFTCGSANYVITFCPSITTRFCYFSPIIFTVFELLWFFFSGASGATFTFVNRCDFTVWPGILGSPKLDSTGFELQKGRSRSFQAPTGWSGRFWGRTTCNFDASGRGVCATGDCGSGEVECNGASATPPATLAEFTLGSGSQDFYDVSLVDGYNLPMIVEGTGGSGPCEKTGCVSDLNRQCPTELRAEGGGACRSACDAFGKPEYCCSGAYNTPAVCKPSMYSQMFKSACPKSYSYAYDDATSTFTCTGADYTITFCPSFPR 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7959168 7963769 - Bda027775.2 Bda14g00980 21031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00980 452 Gene3D Thaumatin 236 448 IPR037176 -
Bda14g00980 452 Gene3D Thaumatin 1 206 IPR037176 -
Bda14g00980 452 ProSitePatterns Thaumatin family signature. 295 311 IPR017949 -
Bda14g00980 452 ProSiteProfiles Thaumatin family profile. 11 206 IPR001938 -
Bda14g00980 452 CDD TLP-PA 237 447 - -
Bda14g00980 452 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 225 449 - -
Bda14g00980 452 SUPERFAMILY Osmotin, thaumatin-like protein 6 207 IPR037176 -
Bda14g00980 452 Pfam Thaumatin family 2 206 IPR001938 -
Bda14g00980 452 Pfam Thaumatin family 242 448 IPR001938 -
Bda14g00980 452 ProSiteProfiles Thaumatin family profile. 235 448 IPR001938 -
Bda14g00980 452 CDD TLP-PA 2 205 - -
Bda14g00980 452 SUPERFAMILY Osmotin, thaumatin-like protein 236 449 IPR037176 -
Bda14g00980 452 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 1 215 - -
Bda14g00980 452 SMART tha2 238 448 IPR001938 -
Bda14g00980 452 SMART tha2 2 206 IPR001938 -
Bda14g00980 452 PANTHER OS03G0233200 PROTEIN 1 215 IPR001938 -
Bda14g00980 452 PANTHER OS03G0233200 PROTEIN 225 449 IPR001938 -
Bda14g00980 452 PRINTS Pathogenesis-related protein signature 295 324 IPR001938 -
Bda14g00980 452 PRINTS Pathogenesis-related protein signature 438 447 IPR001938 -
Bda14g00980 452 PRINTS Pathogenesis-related protein signature 261 270 IPR001938 -
Bda14g00980 452 PRINTS Pathogenesis-related protein signature 237 249 IPR001938 -
Bda14g00980 452 PRINTS Pathogenesis-related protein signature 282 293 IPR001938 -
Bda14g00980 452 PRINTS Pathogenesis-related protein signature 333 349 IPR001938 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00478 Bda-Chr1:31853617 Bda14g00980 Bda-Chr14:7959168 4.88E-41 dispersed
Bda04g00161 Bda-Chr4:4627558 Bda14g00980 Bda-Chr14:7959168 3.00E-26 dispersed
Bda05g01209 Bda-Chr5:60050023 Bda14g00980 Bda-Chr14:7959168 1.20E-27 dispersed
Bda06g00483 Bda-Chr6:6853712 Bda14g00980 Bda-Chr14:7959168 8.36E-78 dispersed
Bda11g01803 Bda-Chr11:53070708 Bda14g00980 Bda-Chr14:7959168 5.50E-69 dispersed
Bda11g01832 Bda-Chr11:53567266 Bda14g00980 Bda-Chr14:7959168 1.58E-34 dispersed
Bda13g01491 Bda-Chr13:37824650 Bda14g00980 Bda-Chr14:7959168 3.14E-63 dispersed
Bda14g00939 Bda-Chr14:7500186 Bda14g00980 Bda-Chr14:7959168 1.09E-67 dispersed
Bda14g00980 Bda-Chr14:7959168 Bda13g01674 Bda-Chr13:40131515 4.50E-56 dispersed
Bda14g00973 Bda-Chr14:7837079 Bda14g00980 Bda-Chr14:7959168 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00980 - - lang:109331061 668.307