Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00989 ATGCGGGCCCTTTGTGACTCCTGCGAAAGTGCACCGGCGATTGTTTTTTGCGCCGCCGACGAAGCTGCCCTTTGCGGCGCCTGTGACGAGAAGGTCCATTTGTGTAATAAGCTTGCTAACCGGCATATAAGGGTAGGACTAGAAAATCCGAGCGATGTTCCTCGTTGTGATATATGCGAAAATACACCCGCTTTCTTCTACTGCGAGGTAGATGGCAGTTCCCTCTGTTTGCAGTGCGATACGATTGTTCACGTTGGAGGTAAAAGAACTCATAAAAGATACCTTCTGCTGAGGCAGAGAGTTGAGTTCCCGGGCGATAAACTTCGTGTTTTTGATGATCCAGCTTGTGCCAAGACGAGACTGTTACTTAATCAACCACTGAAAGTTTCTGAGGGAGAGAGCCGGCCAAGTGATTCTCGATTGTCTGATCCGTGTAATGTTGATGATGGGCTTGTTGAGACGGATGGTACAATGATTGATCTGAATATGAAGCCTCATCGGATTCCTGGACAAGCTTCAAATGATCAGGTGCGAATGGATTGA 543 47.7 MRALCDSCESAPAIVFCAADEAALCGACDEKVHLCNKLANRHIRVGLENPSDVPRCDICENTPAFFYCEVDGSSLCLQCDTIVHVGGKRTHKRYLLLRQRVEFPGDKLRVFDDPACAKTRLLLNQPLKVSEGESRPSDSRLSDPCNVDDGLVETDGTMIDLNMKPHRIPGQASNDQVRMD 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8030086 8032824 + Bda027787.1 Bda14g00989 21040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00989 180 CDD Bbox1_BBX-like 4 47 - -
Bda14g00989 180 Gene3D Classic Zinc Finger 2 96 - -
Bda14g00989 180 SMART bboxneu5 51 96 IPR000315 GO:0008270
Bda14g00989 180 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bda14g00989 180 MobiDBLite consensus disorder prediction 127 147 - -
Bda14g00989 180 Pfam B-box zinc finger 4 34 IPR000315 GO:0008270
Bda14g00989 180 Pfam B-box zinc finger 52 92 IPR000315 GO:0008270
Bda14g00989 180 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 176 - -
Bda14g00989 180 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bda14g00989 180 SUPERFAMILY B-box zinc-binding domain 48 88 - -
Bda14g00989 180 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Bda14g00989 180 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00955 Bda-Chr8:18590465 Bda14g00989 Bda-Chr14:8030086 1.59E-22 dispersed
Bda10g00172 Bda-Chr10:5344462 Bda14g00989 Bda-Chr14:8030086 1.98E-78 dispersed
Bda14g00574 Bda-Chr14:4384124 Bda14g00989 Bda-Chr14:8030086 2.77E-23 dispersed
Bda01g00506 Bda-Chr1:32057229 Bda14g00989 Bda-Chr14:8030086 1.47E-22 wgd
Bda01g01521 Bda-Chr1:51110063 Bda14g00989 Bda-Chr14:8030086 1.90E-20 wgd
Bda11g01843 Bda-Chr11:53635914 Bda14g00989 Bda-Chr14:8030086 5.96E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17083 PF00643 zf-B_box 1.70E-07 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00989 - - tcc:18610806 251.906