Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00992 ATGAGAAAGCCGGAGGCTTCCATTTCCACGAAACCTTGTTTCGAAACTCGGTTTCCGGCGAAGGCGAGAAGCAAGCGGACAAGAGCCGGAGGTAGGTTTTGGGTTCTAGGATCCCCTACGTTGACGGAATCTTCGTCAAGCTCAACCACGTCGTCGTCGTCGACTTCATCACCGTCAAGCCCCTTGCTCTTCTACAACACCGCGGTTCCTCTCCTCGACGAGACAGTTTTCCCGTTCGAAAAGCCGGTTGCTAAGAAACCGAAGAACAGACCCCCAGTCAACGGAAATGGCGGAAGTGGGAGCCAAACAACTCGCAGGTGCAGCCATTGCGGCGTTCCGAAAACGCCACAGTGGAGGGCCGGGCCTCTCGGGGCGAAGACCCTCTGCAACGCCTGTGGTGTTCGATACAAGTCGGGTCGACTCCTACCCGAATACAGACCGGCTTGTAGCCCCACTTTCTCCACCGAATTGCACTCAAACCATCACCGCAAAGTGCTGGAAATGCGCCGAAATAAAGATTGTCCCCCACAACTGGAGAGGAAAACAGAAAACTGA 555 54.95 MRKPEASISTKPCFETRFPAKARSKRTRAGGRFWVLGSPTLTESSSSSTTSSSSTSSPSSPLLFYNTAVPLLDETVFPFEKPVAKKPKNRPPVNGNGGSGSQTTRRCSHCGVPKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSTELHSNHHRKVLEMRRNKDCPPQLERKTEN 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8132974 8133528 - Bda027793.1 Bda14g00992 21043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00992 184 ProSiteProfiles GATA-type zinc finger domain profile. 101 137 IPR000679 GO:0006355|GO:0043565
Bda14g00992 184 MobiDBLite consensus disorder prediction 38 60 - -
Bda14g00992 184 CDD ZnF_GATA 106 154 IPR000679 GO:0006355|GO:0043565
Bda14g00992 184 MobiDBLite consensus disorder prediction 1 60 - -
Bda14g00992 184 MobiDBLite consensus disorder prediction 82 108 - -
Bda14g00992 184 ProSitePatterns GATA-type zinc finger domain. 107 132 IPR000679 GO:0006355|GO:0043565
Bda14g00992 184 Gene3D - 100 151 IPR013088 GO:0006355|GO:0008270
Bda14g00992 184 Pfam GATA zinc finger 107 141 IPR000679 GO:0006355|GO:0043565
Bda14g00992 184 PANTHER GATA TRANSCRIPTION FACTOR 8 173 - -
Bda14g00992 184 MobiDBLite consensus disorder prediction 94 108 - -
Bda14g00992 184 PANTHER GATA TRANSCRIPTION FACTOR 8 173 - -
Bda14g00992 184 SMART GATA_3 101 155 IPR000679 GO:0006355|GO:0043565
Bda14g00992 184 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 102 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00030 Bda-Chr4:483324 Bda14g00992 Bda-Chr14:8132974 9.66E-55 dispersed
Bda14g00992 Bda-Chr14:8132974 Bda15g00165 Bda-Chr15:4214643 3.08E-33 dispersed
Bda11g01846 Bda-Chr11:53656847 Bda14g00992 Bda-Chr14:8132974 8.80E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17085 PF00320 GATA 2.90E-16 CL0167 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00992 - - zju:107410110 219.164