Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g00992 | ATGAGAAAGCCGGAGGCTTCCATTTCCACGAAACCTTGTTTCGAAACTCGGTTTCCGGCGAAGGCGAGAAGCAAGCGGACAAGAGCCGGAGGTAGGTTTTGGGTTCTAGGATCCCCTACGTTGACGGAATCTTCGTCAAGCTCAACCACGTCGTCGTCGTCGACTTCATCACCGTCAAGCCCCTTGCTCTTCTACAACACCGCGGTTCCTCTCCTCGACGAGACAGTTTTCCCGTTCGAAAAGCCGGTTGCTAAGAAACCGAAGAACAGACCCCCAGTCAACGGAAATGGCGGAAGTGGGAGCCAAACAACTCGCAGGTGCAGCCATTGCGGCGTTCCGAAAACGCCACAGTGGAGGGCCGGGCCTCTCGGGGCGAAGACCCTCTGCAACGCCTGTGGTGTTCGATACAAGTCGGGTCGACTCCTACCCGAATACAGACCGGCTTGTAGCCCCACTTTCTCCACCGAATTGCACTCAAACCATCACCGCAAAGTGCTGGAAATGCGCCGAAATAAAGATTGTCCCCCACAACTGGAGAGGAAAACAGAAAACTGA | 555 | 54.95 | MRKPEASISTKPCFETRFPAKARSKRTRAGGRFWVLGSPTLTESSSSSTTSSSSTSSPSSPLLFYNTAVPLLDETVFPFEKPVAKKPKNRPPVNGNGGSGSQTTRRCSHCGVPKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSTELHSNHHRKVLEMRRNKDCPPQLERKTEN | 184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 8132974 | 8133528 | - | Bda027793.1 | Bda14g00992 | 21043 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g00992 | 184 | ProSiteProfiles | GATA-type zinc finger domain profile. | 101 | 137 | IPR000679 | GO:0006355|GO:0043565 | |
Bda14g00992 | 184 | MobiDBLite | consensus disorder prediction | 38 | 60 | - | - | |
Bda14g00992 | 184 | CDD | ZnF_GATA | 106 | 154 | IPR000679 | GO:0006355|GO:0043565 | |
Bda14g00992 | 184 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Bda14g00992 | 184 | MobiDBLite | consensus disorder prediction | 82 | 108 | - | - | |
Bda14g00992 | 184 | ProSitePatterns | GATA-type zinc finger domain. | 107 | 132 | IPR000679 | GO:0006355|GO:0043565 | |
Bda14g00992 | 184 | Gene3D | - | 100 | 151 | IPR013088 | GO:0006355|GO:0008270 | |
Bda14g00992 | 184 | Pfam | GATA zinc finger | 107 | 141 | IPR000679 | GO:0006355|GO:0043565 | |
Bda14g00992 | 184 | PANTHER | GATA TRANSCRIPTION FACTOR | 8 | 173 | - | - | |
Bda14g00992 | 184 | MobiDBLite | consensus disorder prediction | 94 | 108 | - | - | |
Bda14g00992 | 184 | PANTHER | GATA TRANSCRIPTION FACTOR | 8 | 173 | - | - | |
Bda14g00992 | 184 | SMART | GATA_3 | 101 | 155 | IPR000679 | GO:0006355|GO:0043565 | |
Bda14g00992 | 184 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 102 | 163 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00030 | Bda-Chr4:483324 | Bda14g00992 | Bda-Chr14:8132974 | 9.66E-55 | dispersed | |
Bda14g00992 | Bda-Chr14:8132974 | Bda15g00165 | Bda-Chr15:4214643 | 3.08E-33 | dispersed | |
Bda11g01846 | Bda-Chr11:53656847 | Bda14g00992 | Bda-Chr14:8132974 | 8.80E-70 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17085 | PF00320 | GATA | 2.90E-16 | CL0167 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g00992 | - | - | zju:107410110 | 219.164 |