Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g00994 ATGACGTTTAAGGAGGAGAAGGAAATCGCTGATTTGGTTGACATTAGTAGCAGCGACGACGAGGACATCGCAGGAGTCCAAACGAAGAAGCGTTCATTAGCCGAAATTACCTCACAATCCGCGACCAAAGTTTTAGGTCGTCAAGCTAGTCAATCTTCTCAGCCGCAGCCGCTAAGTTCTGCCGATATAACACCATCGGTAGCAGACTACACAAACCTTCACAGTCGCAGCTTTTGGAAAGCTGGCTCTGTAGATGTTCTTCCGACAGCCAAGTCTCAGGTTGCTCAAGGGGAGTTAGAACATGCCCGAGTTCACCCAAAGTTTCTTCATTCTAATGCCACATCCCATAAATGGGCGTTTGGTGCAATTGCTGAGCTCCTGGACAACGCCATTGATGAGGTTCAGAATGGTGCAACTTTTGTTAAGGTCGATAAAATTGATATCAAGAAGGACAATTCTCCAGCTTTACTTTTCCAAGATGATGGTGGAGGTATGGAACCCAGTGGTCTAAGGAAATGTATGAGTTTAGGTTATTCTTCAAAGAAGTCAGACCAAACGATTGGACAATATGGGAATGGATTCAAGACAAGTACCATGCGACTAGGCGCCGATGTTATTGTTTTCAGTCGTGCAACTCGAGCAGGCCAAGCAACCCAATCTGTCGGCCTTTTATCCTATACGTTTTTGCGGAAAACTGGGCAGGATGATGTCATTGTTCCAATGATAGATTTTGATGTTTCTGGACATAGGGCGGAGCCAATAATGTATGGTTCCCAGGATGATTGGAATTCCACCTTGGAAATTATTCTTGAATGGTCTCCATTTACATCAAAAGAAGATCTCATGGCACAGTTTGAGGACATCGGGCCGCATGGAACAAAAATAATAATATACAATCTGTGGCTGAATGATGAAGGCATATATGAATTGAGTTTTGATGATGATGATAAGGACATACGGCTGAGGGATGAAGCTCATCGTGGAGGTTTGGTAAAGTTGAGCAAAAAAACTGTGGAATGGCAGTCACATATTTCTTATCAGATTCGGTATTCATTAAGGGCATATGCTTCAATGTTATACCTCAGAAAGTTTACCAACTTTCACATTATATTAAGGGGGAAAGCAGTCCAGCAGTTTTTTATAGTTGATAACTTGAAATATTTGAAAGTGGTAACATACAAGCCTCAGCTTCCTTTGGCATCAAAAGAGGTCATTGTGGAGACAACCATAGGATTTATAAAGGAGGCACCTGATCTTGGAGTTAGTGGATTCAATGTGTATCACAAAAATCGACTCATTATGCCTTTCTGGAAAGTCACTCGTGATGGTTCTTCTCAAGGGAATGGTGTTGTGGGAGTTCTTGAGGCTAACTTTATGGAGCCAGCACATGACAAGCAAGAATTTGAGAGATCATTAGTCTTTATACGACTAGAGACAAGGCTTAAACAAATGGTAGCAGAATATTGGAAAACCCATCGTCAGTATGTTGGACATCACCCTCCTGGTTTTAGTGCTCATAAAACGCAGAAGAATCATCCTCCTTTGCCTTCTGTTAGAAATTCAGTTAACTTTGGAAAGCGGGTGGCAGAACAAATTAATGTCTCAACTCCTATGGACCTTGATGGCCAACCAGAAAATACCCGCAGCCAAATTATTCTTGACAAAAACTTGGATTTTGTCCAGCACACTAGTGGGCCAGGAGCTGAATATGAAGTGGTTGACGTAGACAATCTTGATGATCCAGAGGACTTATCTGCCGAAGAAATCCGTGAAGAAAACATTCAACTATTTATTAGGTGCGAGGAACACTCGCAGAATCAGATCAAGTTTAAACAGCAGATTCAAGACCTAGAGAAGGAGTTAAAAGAAGCCAAAATGAAACGTGATCAGCTTTTATCTTATGTGGAGTCTAGGAAAAGGCTGAATGCTTTGAAAGGAGAAATTAAAAGGCTTTGA 1956 41.82 MTFKEEKEIADLVDISSSDDEDIAGVQTKKRSLAEITSQSATKVLGRQASQSSQPQPLSSADITPSVADYTNLHSRSFWKAGSVDVLPTAKSQVAQGELEHARVHPKFLHSNATSHKWAFGAIAELLDNAIDEVQNGATFVKVDKIDIKKDNSPALLFQDDGGGMEPSGLRKCMSLGYSSKKSDQTIGQYGNGFKTSTMRLGADVIVFSRATRAGQATQSVGLLSYTFLRKTGQDDVIVPMIDFDVSGHRAEPIMYGSQDDWNSTLEIILEWSPFTSKEDLMAQFEDIGPHGTKIIIYNLWLNDEGIYELSFDDDDKDIRLRDEAHRGGLVKLSKKTVEWQSHISYQIRYSLRAYASMLYLRKFTNFHIILRGKAVQQFFIVDNLKYLKVVTYKPQLPLASKEVIVETTIGFIKEAPDLGVSGFNVYHKNRLIMPFWKVTRDGSSQGNGVVGVLEANFMEPAHDKQEFERSLVFIRLETRLKQMVAEYWKTHRQYVGHHPPGFSAHKTQKNHPPLPSVRNSVNFGKRVAEQINVSTPMDLDGQPENTRSQIILDKNLDFVQHTSGPGAEYEVVDVDNLDDPEDLSAEEIREENIQLFIRCEEHSQNQIKFKQQIQDLEKELKEAKMKRDQLLSYVESRKRLNALKGEIKRL 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8145622 8159495 - Bda027795.3 Bda14g00994 21045

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g00994 651 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 6 642 IPR045261 GO:0016887
Bda14g00994 651 Coils Coil 600 651 - -
Bda14g00994 651 Gene3D - 104 309 IPR036890 -
Bda14g00994 651 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 121 215 - -
Bda14g00994 651 Pfam Morc6 ribosomal protein S5 domain 2-like 350 489 IPR041006 -
Bda14g00994 651 PANTHER PROTEIN MICRORCHIDIA 1-RELATED 6 642 - -
Bda14g00994 651 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 119 311 IPR036890 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g00994 - - - qsu:111992712 763.451
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00994 Bda-Chr14:8145622 Bda14g01346 Bda-Chr14:15555856 3.30E-67 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1335 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda14g00994 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011668 1 3 1 0 0 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g00994 Bda_Chr14 FPKM 13.329289 13.471931 0.591944 0.734592 39.976326 41.28558 43.067387 0.556909 0.537122