Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01003 ATGAATGATCTAATGACAAAATCGTTCTTAAGTTATGTGGAATTGAAGAAACAAGCAATGAAAGACATGGAAGCCCATCCCGACATAGAAACAGGCCAACTCAATCCTGCCGTTGAACATAATCTCTCCAAGTTCTTTGAAGAAGCGGGCAAAGTCAAAACTGAAATGGAAGAGATCAGCAATCTCTTGATCGAACTTCAAACACTCAATGAGGAGGCAAAGTCCATTTTCAGCGCCAAGATTCTTGGTGGGATAAGAGATCGAATGGATTCAAACATGGTTTCAATCCTTCGCAAAGCAAAGACGGTGAAGTCTAGGCTGGAAGCACTCGATCGATCCAACCTAAAAAATCGAAGAAATTCAGAAGCCTTTAAAGAAAGCAGTCATGTTGACAGAACCAGGATTTCTGTCACTAACGGTTTAAGAGTCAAGCTGAGAGAATTAATGAATGATTTTCAGTTCTTGAGAGAGAAAATTCTACGTGATCATAAGGAAGACCTAAGGAGGACGTACTACACTGCAACAGGCGAGCAACTGAGTGAGGAAGTGATTGAGAAAATAGTCATGGGGGGCGAGAGAATTGACTTATTTCAGGGTAATCAAGCCAGGCACCAGGCTGTTTTAGAGGTTCAGAGGAGCTTGAGCAAGCTTCATCAGGTTTTTCTCGACATGGCTGTGCTTGTTGAGACGCAGGGAGAAAAAATGAATGACATTGAGGAGAATGTAGCTAATGCAAGAGGCTCCATCAATGGCGGAACTAATAGTCTTTACTATGCCAATCAGACTAAGAAAAACAAGAAATGGGCGTACTGGGTTGCAGCTGTTGTACTGATCATAGTGCTGGTTTGCTTCATAGCTACACTAGTTTCTTGA 873 42.04 MNDLMTKSFLSYVELKKQAMKDMEAHPDIETGQLNPAVEHNLSKFFEEAGKVKTEMEEISNLLIELQTLNEEAKSIFSAKILGGIRDRMDSNMVSILRKAKTVKSRLEALDRSNLKNRRNSEAFKESSHVDRTRISVTNGLRVKLRELMNDFQFLREKILRDHKEDLRRTYYTATGEQLSEEVIEKIVMGGERIDLFQGNQARHQAVLEVQRSLSKLHQVFLDMAVLVETQGEKMNDIEENVANARGSINGGTNSLYYANQTKKNKKWAYWVAAVVLIIVLVCFIATLVS 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8450716 8451588 + Bda027812.1 Bda14g01003 21054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01003 290 CDD SNARE_syntaxin1-like 201 256 - -
Bda14g01003 290 CDD SynN 42 194 IPR006011 GO:0016020
Bda14g01003 290 SMART SynN_4 37 164 IPR006011 GO:0016020
Bda14g01003 290 Gene3D - 38 167 - -
Bda14g01003 290 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 197 259 IPR000727 -
Bda14g01003 290 Coils Coil 52 72 - -
Bda14g01003 290 PANTHER SYNTAXIN 3 286 IPR045242 -
Bda14g01003 290 SUPERFAMILY t-snare proteins 40 252 IPR010989 GO:0016020|GO:0016192
Bda14g01003 290 PANTHER SYNTAXIN-112 3 286 - -
Bda14g01003 290 Pfam Syntaxin 44 198 IPR006011 GO:0016020
Bda14g01003 290 Pfam Syntaxin 201 232 IPR006011 GO:0016020
Bda14g01003 290 Gene3D - 194 290 - -
Bda14g01003 290 SMART tSNARE_6 192 259 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00943 Bda-Chr8:17704860 Bda14g01003 Bda-Chr14:8450716 7.11E-09 dispersed
Bda14g01003 Bda-Chr14:8450716 Bda09g01276 Bda-Chr9:44512231 8.26E-64 dispersed
Bda06g00929 Bda-Chr6:25095255 Bda14g01003 Bda-Chr14:8450716 4.15E-128 transposed
Bda11g01860 Bda-Chr11:53717274 Bda14g01003 Bda-Chr14:8450716 8.94E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01003 K08486 - jre:108997509 383.259