Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01007 | ATGGAAGTGGGTTATAATTCACAAAATAGGGAGTCCTCGTCCAAGCTGACTTCTACAGCCTTTGCTCAAACAGTTGAAGAAAATACAAGCGATGAAACAATTCAACATGGAGAGACAGCTTCCAATCCTCCTCAAACCCTAGACCAGAATTACCTCACTTATCATCTTCATCACCACCATCATTTTCCTCACAGCCGACAATTGAATCCTTCTCCAGAAATTTCCGGCAAATACAGCAAAGATCCACACCCCAACCGGCCAGATCTGGGGCCAGCTCCTACTACTCCCCTGCCCGGAAGATTGAACCCGAAAACTCCATTGCAACCTGGAGCTTCCACCAGTGTAACTATTTCCTCTCCAGTTCGATATCGAGAATGTTTAAAGAACCACGCGGCGAGTATGGGCGGGTACGTTCTCGATGGATGCGGAGAATTCATGCCAAACGGAGAAAAAAACAGTAGAGAAGGTTTGAAATGTGCGGCCTGCGATTGCCATCGTAACTTTCACCGGAAAGAGACCGACGGCGAGCAGCCAGTTCCGTCTTCGGCGAATTGTTACCACCCCTACAGCTCGAACAACACCACCACACGAAGAAGCGATCAAAGAATGGTTCCGACACCTTCCCATCTCCACCACCAGGGATCACTCTCTCTCGGGCCACCGCCGCCGATGATGATGGCCTTTGGAAGTTCCAGTGGAGCTGCAGCGGAGTCTTCAAGCGAAGATCTAGCTATGGGACATCAACCACAATCATCAAAAAAGCGGTTTCGGACAAAATTCACAAATGAACAGAAAGATAGGATGATGGAGTTCGCTGAAAAACTGGGATGGAAGATTCAGAAGCATGATGAAGAAGAGATGCAGCAGTTCTGTACCGAAGCGGGCGTAAAGAGGCAGGTTTTCAAGGTATGGATGCATAACAACAAGCCAACCACAAAAAAACATCAAATGTAA | 954 | 47.8 | MEVGYNSQNRESSSKLTSTAFAQTVEENTSDETIQHGETASNPPQTLDQNYLTYHLHHHHHFPHSRQLNPSPEISGKYSKDPHPNRPDLGPAPTTPLPGRLNPKTPLQPGASTSVTISSPVRYRECLKNHAASMGGYVLDGCGEFMPNGEKNSREGLKCAACDCHRNFHRKETDGEQPVPSSANCYHPYSSNNTTTRRSDQRMVPTPSHLHHQGSLSLGPPPPMMMAFGSSSGAAAESSSEDLAMGHQPQSSKKRFRTKFTNEQKDRMMEFAEKLGWKIQKHDEEEMQQFCTEAGVKRQVFKVWMHNNKPTTKKHQM | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 8472491 | 8473444 | - | Bda027816.1 | Bda14g01007 | 21058 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01007 | 317 | MobiDBLite | consensus disorder prediction | 177 | 213 | - | - | |
Bda14g01007 | 317 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 45 | 315 | - | - | |
Bda14g01007 | 317 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 122 | 172 | IPR006456 | - | |
Bda14g01007 | 317 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Bda14g01007 | 317 | MobiDBLite | consensus disorder prediction | 1 | 116 | - | - | |
Bda14g01007 | 317 | MobiDBLite | consensus disorder prediction | 86 | 103 | - | - | |
Bda14g01007 | 317 | Gene3D | - | 237 | 314 | - | - | |
Bda14g01007 | 317 | MobiDBLite | consensus disorder prediction | 171 | 221 | - | - | |
Bda14g01007 | 317 | Pfam | ZF-HD protein dimerisation region | 121 | 173 | IPR006456 | - | |
Bda14g01007 | 317 | SUPERFAMILY | Homeodomain-like | 241 | 315 | IPR009057 | - | |
Bda14g01007 | 317 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 7 | 45 | 315 | - | - | |
Bda14g01007 | 317 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 253 | 309 | IPR006455 | - | |
Bda14g01007 | 317 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 123 | 172 | IPR006456 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01565 | Bda-Chr11:48719810 | Bda14g01007 | Bda-Chr14:8472491 | 4.09E-43 | dispersed | |
Bda01g01497 | Bda-Chr1:50842309 | Bda14g01007 | Bda-Chr14:8472491 | 6.55E-64 | wgd | |
Bda11g01865 | Bda-Chr11:53736302 | Bda14g01007 | Bda-Chr14:8472491 | 5.31E-155 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17087 | PF04770 | ZF-HD_dimer | 2.80E-29 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01007 | - | - | qsu:111998832 | 285.034 |