Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01007 ATGGAAGTGGGTTATAATTCACAAAATAGGGAGTCCTCGTCCAAGCTGACTTCTACAGCCTTTGCTCAAACAGTTGAAGAAAATACAAGCGATGAAACAATTCAACATGGAGAGACAGCTTCCAATCCTCCTCAAACCCTAGACCAGAATTACCTCACTTATCATCTTCATCACCACCATCATTTTCCTCACAGCCGACAATTGAATCCTTCTCCAGAAATTTCCGGCAAATACAGCAAAGATCCACACCCCAACCGGCCAGATCTGGGGCCAGCTCCTACTACTCCCCTGCCCGGAAGATTGAACCCGAAAACTCCATTGCAACCTGGAGCTTCCACCAGTGTAACTATTTCCTCTCCAGTTCGATATCGAGAATGTTTAAAGAACCACGCGGCGAGTATGGGCGGGTACGTTCTCGATGGATGCGGAGAATTCATGCCAAACGGAGAAAAAAACAGTAGAGAAGGTTTGAAATGTGCGGCCTGCGATTGCCATCGTAACTTTCACCGGAAAGAGACCGACGGCGAGCAGCCAGTTCCGTCTTCGGCGAATTGTTACCACCCCTACAGCTCGAACAACACCACCACACGAAGAAGCGATCAAAGAATGGTTCCGACACCTTCCCATCTCCACCACCAGGGATCACTCTCTCTCGGGCCACCGCCGCCGATGATGATGGCCTTTGGAAGTTCCAGTGGAGCTGCAGCGGAGTCTTCAAGCGAAGATCTAGCTATGGGACATCAACCACAATCATCAAAAAAGCGGTTTCGGACAAAATTCACAAATGAACAGAAAGATAGGATGATGGAGTTCGCTGAAAAACTGGGATGGAAGATTCAGAAGCATGATGAAGAAGAGATGCAGCAGTTCTGTACCGAAGCGGGCGTAAAGAGGCAGGTTTTCAAGGTATGGATGCATAACAACAAGCCAACCACAAAAAAACATCAAATGTAA 954 47.8 MEVGYNSQNRESSSKLTSTAFAQTVEENTSDETIQHGETASNPPQTLDQNYLTYHLHHHHHFPHSRQLNPSPEISGKYSKDPHPNRPDLGPAPTTPLPGRLNPKTPLQPGASTSVTISSPVRYRECLKNHAASMGGYVLDGCGEFMPNGEKNSREGLKCAACDCHRNFHRKETDGEQPVPSSANCYHPYSSNNTTTRRSDQRMVPTPSHLHHQGSLSLGPPPPMMMAFGSSSGAAAESSSEDLAMGHQPQSSKKRFRTKFTNEQKDRMMEFAEKLGWKIQKHDEEEMQQFCTEAGVKRQVFKVWMHNNKPTTKKHQM 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8472491 8473444 - Bda027816.1 Bda14g01007 21058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01007 317 MobiDBLite consensus disorder prediction 177 213 - -
Bda14g01007 317 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 45 315 - -
Bda14g01007 317 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 122 172 IPR006456 -
Bda14g01007 317 MobiDBLite consensus disorder prediction 1 52 - -
Bda14g01007 317 MobiDBLite consensus disorder prediction 1 116 - -
Bda14g01007 317 MobiDBLite consensus disorder prediction 86 103 - -
Bda14g01007 317 Gene3D - 237 314 - -
Bda14g01007 317 MobiDBLite consensus disorder prediction 171 221 - -
Bda14g01007 317 Pfam ZF-HD protein dimerisation region 121 173 IPR006456 -
Bda14g01007 317 SUPERFAMILY Homeodomain-like 241 315 IPR009057 -
Bda14g01007 317 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 45 315 - -
Bda14g01007 317 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 253 309 IPR006455 -
Bda14g01007 317 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 123 172 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01565 Bda-Chr11:48719810 Bda14g01007 Bda-Chr14:8472491 4.09E-43 dispersed
Bda01g01497 Bda-Chr1:50842309 Bda14g01007 Bda-Chr14:8472491 6.55E-64 wgd
Bda11g01865 Bda-Chr11:53736302 Bda14g01007 Bda-Chr14:8472491 5.31E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17087 PF04770 ZF-HD_dimer 2.80E-29 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01007 - - qsu:111998832 285.034