Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01019 | ATGAGTGCAAAAGTCAATCTGACAACCCCATCGTCGCCGGATAACATGTCCGATTGTGGTTCCAAAGAGCAGGACAGGTTTCTTCCCATTGCCAACGTTGGCCGTATCATGAAGAAATCTCTCCCCTCAAACGCTAAAATATCGAAGGAAGCCAAAGAAACCGTCCAGGAATGTGTTTCTGAGTTCATTAGCTTCATCACCGGAGAAGCTTCCGATAAGTGTCTTCGTGAGAAGAGGAAGACGATCAACGGAGATGATCTTTTGTGGGCCATGACCACTCTTGGTTTCGAAAATTACGTCGGACCCTTGAAAGTTTACCTCGGCAAGTACAGAGAAACTGAAGAAGAAGACTCTCTCCCAAAGTCCTCCTCGGTCCCCACCAAACCCTCGTATCCTTTGGCCTTTACAGCGAACGTTGACCTTCAGAACTCTAATGGTAGAGTCATCAGCTATGGAGACAACCTCAATAATATAGCTTTTAAGGTCAATAATGGAGATGCGAATGGGAGTAGAGCCATGGCGGCTCATCTTCATAATGGATCAGACTGGTAA | 552 | 46.2 | MSAKVNLTTPSSPDNMSDCGSKEQDRFLPIANVGRIMKKSLPSNAKISKEAKETVQECVSEFISFITGEASDKCLREKRKTINGDDLLWAMTTLGFENYVGPLKVYLGKYRETEEEDSLPKSSSVPTKPSYPLAFTANVDLQNSNGRVISYGDNLNNIAFKVNNGDANGSRAMAAHLHNGSDW | 183 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 8589455 | 8590006 | - | Bda027827.1 | Bda14g01019 | 21070 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01019 | 183 | SUPERFAMILY | Histone-fold | 24 | 119 | IPR009072 | GO:0046982 | |
Bda14g01019 | 183 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 27 | 91 | IPR003958 | - | |
Bda14g01019 | 183 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 58 | 74 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Bda14g01019 | 183 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 | 11 | 166 | - | - | |
Bda14g01019 | 183 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bda14g01019 | 183 | Gene3D | Histone, subunit A | 15 | 129 | IPR009072 | GO:0046982 | |
Bda14g01019 | 183 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 11 | 166 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Bda14g01019 | 183 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Bda14g01019 | 183 | PRINTS | CCAAT-binding transcription factor subunit A signature | 55 | 73 | - | - | |
Bda14g01019 | 183 | PRINTS | CCAAT-binding transcription factor subunit A signature | 93 | 111 | - | - | |
Bda14g01019 | 183 | PRINTS | CCAAT-binding transcription factor subunit A signature | 74 | 92 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00601 | Bda-Chr4:54650518 | Bda14g01019 | Bda-Chr14:8589455 | 2.76E-48 | dispersed | |
Bda14g00336 | Bda-Chr14:2403587 | Bda14g01019 | Bda-Chr14:8589455 | 1.60E-53 | dispersed | |
Bda14g01019 | Bda-Chr14:8589455 | Bda15g00184 | Bda-Chr15:4420974 | 3.25E-52 | dispersed | |
Bda14g01019 | Bda-Chr14:8589455 | Bda13g00590 | Bda-Chr13:6927795 | 2.33E-59 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17092 | PF00808 | CBFD_NFYB_HMF | 1.20E-26 | CL0012 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01019 | K08065 | - | csin:114301228 | 210.69 |