Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01019 ATGAGTGCAAAAGTCAATCTGACAACCCCATCGTCGCCGGATAACATGTCCGATTGTGGTTCCAAAGAGCAGGACAGGTTTCTTCCCATTGCCAACGTTGGCCGTATCATGAAGAAATCTCTCCCCTCAAACGCTAAAATATCGAAGGAAGCCAAAGAAACCGTCCAGGAATGTGTTTCTGAGTTCATTAGCTTCATCACCGGAGAAGCTTCCGATAAGTGTCTTCGTGAGAAGAGGAAGACGATCAACGGAGATGATCTTTTGTGGGCCATGACCACTCTTGGTTTCGAAAATTACGTCGGACCCTTGAAAGTTTACCTCGGCAAGTACAGAGAAACTGAAGAAGAAGACTCTCTCCCAAAGTCCTCCTCGGTCCCCACCAAACCCTCGTATCCTTTGGCCTTTACAGCGAACGTTGACCTTCAGAACTCTAATGGTAGAGTCATCAGCTATGGAGACAACCTCAATAATATAGCTTTTAAGGTCAATAATGGAGATGCGAATGGGAGTAGAGCCATGGCGGCTCATCTTCATAATGGATCAGACTGGTAA 552 46.2 MSAKVNLTTPSSPDNMSDCGSKEQDRFLPIANVGRIMKKSLPSNAKISKEAKETVQECVSEFISFITGEASDKCLREKRKTINGDDLLWAMTTLGFENYVGPLKVYLGKYRETEEEDSLPKSSSVPTKPSYPLAFTANVDLQNSNGRVISYGDNLNNIAFKVNNGDANGSRAMAAHLHNGSDW 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8589455 8590006 - Bda027827.1 Bda14g01019 21070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01019 183 SUPERFAMILY Histone-fold 24 119 IPR009072 GO:0046982
Bda14g01019 183 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
Bda14g01019 183 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bda14g01019 183 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 11 166 - -
Bda14g01019 183 MobiDBLite consensus disorder prediction 1 21 - -
Bda14g01019 183 Gene3D Histone, subunit A 15 129 IPR009072 GO:0046982
Bda14g01019 183 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 11 166 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bda14g01019 183 MobiDBLite consensus disorder prediction 1 18 - -
Bda14g01019 183 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Bda14g01019 183 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Bda14g01019 183 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00601 Bda-Chr4:54650518 Bda14g01019 Bda-Chr14:8589455 2.76E-48 dispersed
Bda14g00336 Bda-Chr14:2403587 Bda14g01019 Bda-Chr14:8589455 1.60E-53 dispersed
Bda14g01019 Bda-Chr14:8589455 Bda15g00184 Bda-Chr15:4420974 3.25E-52 dispersed
Bda14g01019 Bda-Chr14:8589455 Bda13g00590 Bda-Chr13:6927795 2.33E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17092 PF00808 CBFD_NFYB_HMF 1.20E-26 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01019 K08065 - csin:114301228 210.69