Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g01067 | ATGGATACGGGCGGTCGACTCATTGCTGGCTCTCACAATCGGAACGAGTTTGTTCTTATCAATGCTGAAGAAAATGGACGAATCACGTCTGTGAAAGAGCTGAGCGGCCAAGTATGCCACATTTGCGGGGATGAGATAGAAGTTGCCTTCGACGGAGAGCCATTTGTTGCCTGTAATGAATGCGCTTTTCCCGTGTGTCGACCTTGCTACGAGTACGAGAGGAGAGAAGGAAATCAAGCTTGCCCTCAGTGTAAAACTAGATATAAACGCATCAAAGGCAAGGCTTTTTCCTTTTCTTTTCAGAATTCTTATTCTCCGAGGGTTGAGGGTGACGAGGAAGAAGATGACATTGATGATTTGGACAATGAATTTGACTACGAGACGACGGGTTCACAACACGGGTCAGAAGCTTTGTATAGTTCTCGCTACAACACAGTTCGTAATTCATCTGGAATTCCCTCACATGTGGAAAACAAATCTTCGAATGCCCCAACCGAAATCCCTTTGCTTACCTATGGTGAGGAGGATTCGGACATATCTACCGATCAACACGCTCTTATTGTACCTCCCTTTATTGATCACAGAAATAGAGTTCATTTTATGCCTTCTTCCGACCGTTCCATACCTTTGCAATCCAGACCTATGGTTCCGAAAAAAGATATTGCTGTTTATGGGTATGGGAGTGTGGCATGGAAGGATCGAATGGACGAGTGGAAGAGAAGGCAAAATGATAAACTTCAGGTGGTTAAGCACCATGATGAAAATGATCTCGATGATTCTGATATCCCCATGATGGATGAGGGAAGGCAGCCATTATCACGAAAATTACCTATTTCTTCGAGCAAGATAAATCCTTATCGATTAATTATAAGTCTTCGACTTGTTATCATTAGCTTCTTTTTCCATTATCGACTGCGTCATCCAGTCCGCGATGCATATGGCTTGTGGTTGACATCTGTTATATGTGAAATTTGGTTTGCTGTGTCGTGGATTCTAGATCAGTTTCCCAAATGGTACCCTATTGAACGAGAAACATATCTCGATCGCTTATCACTGAGGTATGAAAAAGAAGGGAAGCCTTCAGAGTTAGCCAATGTAGACATCTTTGTTAGTACAGTCGATCCGACGAAGGAACCTCCATTAATTACTGCAAACACTGTTCTTTCCATCCTAGCCGTTGATTATCCGGTGGAGAAAGTCGCGTGCTATGTCTCAGACGATGGAGCAGCGATGTTAACGTTCGAAGCTTTGTCTGAGACGTCGGAGTTTGCTAGAAAGTGGGTCCCATTTTGTAAGAAGTTCAATATCGAGCCCCGGGCCCCAGAGTGGTATTTTTGTCAGAAGATTGATTACTTGAAAAACAAAGTCCATCCCGCCTTTGTGAGGGAAAGGCGCGCAATGAAGAGGGAATATGAAGAATTTAAAGTCAGGATAAATGGACTTGTAGGGATGGCACAAAAAGTCCCTGAGGAAGGCTGGACGATGCAGGATGGAACTCCATGGCCGGGGAACCTTGTCCGGGACCATCCCGGCATGATTCAGGTCTTTCTCGGTGACAATGGAGTTCGTGATTGTGATGAGAATGAGCTACCTAGGTTGGTTTATGTTTCTCGTGAAAAAAGACCAGGGTTCGAGCACCACAAAAAGGCCGGGGCTATGAATGCTCTGGTGCGAGTTTCGGCTGTTCTTTCAAATGCACCTTATCTTCTGAATGTGGACTGCGATCACTATATCAATAACAGCAAGGCTATCCGAGAAGCTATGTGTTTCATGATGGACCCTCAGTCAGGGAAGAAAGTTTGCTATGTGCAGTTCCCTCAAAGGTTCGACGGGATTGATCGGCACGATAGATACTCAAATCGGAATGTTGTGTTTTTTGACATCAACATGAAAGGATTGGATGTCGGCTGGATTTACGGCTCGGTGACTGAGGATATTCTGACTGGTTTTAAGATGCACTGCCATGGATGGCGATCTGTGTATTGCATACCTCGTCGACCTGCTTTCAAAGGGTCGGCCCCTAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAACCTCTCTGACGTTTGCACCAAGTTCTTCGGTGGGCCCTCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGATACTACAAAATGCTACAGTAATTTCTATTAA | 2688 | 35.19 | MDTGGRLIAGSHNRNEFVLINAEENGRITSVKELSGQVCHICGDEIEVAFDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGKAFSFSFQNSYSPRVEGDEEEDDIDDLDNEFDYETTGSQHGSEALYSSRYNTVRNSSGIPSHVENKSSNAPTEIPLLTYGEEDSDISTDQHALIVPPFIDHRNRVHFMPSSDRSIPLQSRPMVPKKDIAVYGYGSVAWKDRMDEWKRRQNDKLQVVKHHDENDLDDSDIPMMDEGRQPLSRKLPISSSKINPYRLIISLRLVIISFFFHYRLRHPVRDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELANVDIFVSTVDPTKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEWYFCQKIDYLKNKVHPAFVRERRAMKREYEEFKVRINGLVGMAQKVPEEGWTMQDGTPWPGNLVRDHPGMIQVFLGDNGVRDCDENELPRLVYVSREKRPGFEHHKKAGAMNALVRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMMDPQSGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDVGWIYGSVTEDILTGFKMHCHGWRSVYCIPRRPAFKGSAPKKKEKKKKKKKKKKKKKKKKKKKKKKKKSNLSDVCTKFFGGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTTKCYSNFY | 895 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 9244160 | 9249199 | - | Bda027884.1 | Bda14g01067 | 21118 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g01067 | 895 | Coils | Coil | 675 | 704 | - | - | |
| Bda14g01067 | 895 | PANTHER | CELLULOSE SYNTHASE | 1 | 634 | - | - | |
| Bda14g01067 | 895 | CDD | mRING-HC-C4C4_CesA_plant | 37 | 87 | - | - | |
| Bda14g01067 | 895 | PANTHER | CELLULOSE SYNTHASE | 632 | 675 | - | - | |
| Bda14g01067 | 895 | Pfam | Cellulose synthase | 366 | 634 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
| Bda14g01067 | 895 | MobiDBLite | consensus disorder prediction | 668 | 701 | - | - | |
| Bda14g01067 | 895 | Pfam | Zinc-binding RING-finger | 30 | 116 | IPR027934 | - | |
| Bda14g01067 | 895 | SUPERFAMILY | RING/U-box | 25 | 122 | - | - | |
| Bda14g01067 | 895 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 508 | 667 | IPR029044 | - | |
| Bda14g01067 | 895 | MobiDBLite | consensus disorder prediction | 670 | 701 | - | - | |
| Bda14g01067 | 895 | ProSiteProfiles | Zinc finger RING-type profile. | 39 | 85 | IPR001841 | - | |
| Bda14g01067 | 895 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 632 | 675 | - | - | |
| Bda14g01067 | 895 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 1 | 634 | - | - | |
| Bda14g01067 | 895 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 123 | IPR013083 | - | |
| Bda14g01067 | 895 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 527 | 662 | IPR029044 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda14g01067 | Bda-Chr14:9244160 | Bda01g00738 | Bda-Chr1:34669730 | 7.44E-16 | dispersed | |
| Bda14g01064 | Bda-Chr14:9146473 | Bda14g01067 | Bda-Chr14:9244160 | 5.51E-20 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g01067 | K10999 | - | tcc:18611727 | 1100.12 |