Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g01068 | ATGGAGAAATCCCCAGAGGAAGAACACCCACAGAAGGCTTTTGGTTGGGCTGCTAGAGACACTTCTGGTCTTCTCTCTCCCTTCCATTTTTCTAGAAGAGACAATGGAGATGATGATGTAACTGTGAAGGTTCTGTACTGTGGGGTTTGCCATTCTGACCTACACTGTGTTAAGAATGAGTGGGGCTACACAAGTTATCCTATTGTTCCCGGGCATGAAATCACTGGTATTGTGACGAAGCTCGGAAGCAACGTGAAGAAGTTCAACGTGGGCGACCGAGTTGGAGTCGGCGTGATAATAGGGTCTTGTATGAGCTGCGACAAATGCGAAGACGACTTGGAAAACTACTGTCCTAAAGTGATGTTCACATATAACTCATTCTTCCACGATGGAACAAAAAACTATGGAGGCTATTCTGATATGATTGTGGTGGATCAGCATTTTGTTCTTCGATTTCCAGAAAATTTACCTCTCGATTCGGGGGCTCCTCTCCTGTGCGCCGGAGTTTCGATCTACAGCCCGATGAAATATTATGGTTTGACAGAGGCTGGCAAGCATTTGGGGGTGGTCGGCCTGGGTGGTCTAGGCCATGTTGCTGTCAAAATTGGGAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACCTCCCCCTCCAAGGAAGATGAGGCCATTAACAAGATTGGAGCTGATTCTTTCCTTGTCTCCACTGATCCACTCAAAATAAAGGCAACTCTGGGCAGCATGGATTTCATAATTGACACAGTGGCTGCTGTCCATCCCCTTGCTCCTCTGCTTGGTTTGTTGAAGATTAATGGAAAGCTGATTACAGTGGGTCTGCCTATTCAGCCCCTTGAGCTCCCTGTCTTTCCCCTCGTGTTTGGAAGGAAGATGGTGGGGGGGAGTGACATTGGAGGAGTAAAAGAGACACAAGAGATGCTGGATTTCTGTGCAAAACACAACATTTTGTCCGACATCGAACTGATTCAGATCGATGAAATCAACACGGCATTTGAAAGGCTGGCCAAATCGGACGTCCGGTATCGATTTGTGATAGACGTGGCGAATTCCCTGACGAAATAA | 1080 | 46.76 | MEKSPEEEHPQKAFGWAARDTSGLLSPFHFSRRDNGDDDVTVKVLYCGVCHSDLHCVKNEWGYTSYPIVPGHEITGIVTKLGSNVKKFNVGDRVGVGVIIGSCMSCDKCEDDLENYCPKVMFTYNSFFHDGTKNYGGYSDMIVVDQHFVLRFPENLPLDSGAPLLCAGVSIYSPMKYYGLTEAGKHLGVVGLGGLGHVAVKIGKAFGLKVTVISTSPSKEDEAINKIGADSFLVSTDPLKIKATLGSMDFIIDTVAAVHPLAPLLGLLKINGKLITVGLPIQPLELPVFPLVFGRKMVGGSDIGGVKETQEMLDFCAKHNILSDIELIQIDEINTAFERLAKSDVRYRFVIDVANSLTK | 359 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 9251372 | 9253523 | - | Bda027885.1 | Bda14g01068 | 21119 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g01068 | 359 | Pfam | Alcohol dehydrogenase GroES-like domain | 38 | 150 | IPR013154 | - | |
| Bda14g01068 | 359 | Gene3D | - | 16 | 353 | - | - | |
| Bda14g01068 | 359 | SUPERFAMILY | GroES-like | 9 | 199 | IPR011032 | - | |
| Bda14g01068 | 359 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 156 | 321 | IPR036291 | - | |
| Bda14g01068 | 359 | CDD | CAD1 | 14 | 352 | - | - | |
| Bda14g01068 | 359 | Pfam | Zinc-binding dehydrogenase | 194 | 317 | IPR013149 | - | |
| Bda14g01068 | 359 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270|GO:0016491 | |
| Bda14g01068 | 359 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 11 | 357 | - | - | |
| Bda14g01068 | 359 | PANTHER | ALDEHYDE REDUCTASE | 11 | 357 | - | - | |
| Bda14g01068 | 359 | Gene3D | - | 167 | 323 | - | - | |
| Bda14g01068 | 359 | SMART | PKS_ER_names_mod | 23 | 351 | IPR020843 | GO:0016491 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda08g01193 | Bda-Chr8:48038839 | Bda14g01068 | Bda-Chr14:9251372 | 1.55E-120 | dispersed | |
| Bda09g00624 | Bda-Chr9:9143197 | Bda14g01068 | Bda-Chr14:9251372 | 3.33E-123 | dispersed | |
| Bda11g01352 | Bda-Chr11:15391744 | Bda14g01068 | Bda-Chr14:9251372 | 0 | dispersed | |
| Bda14g01068 | Bda-Chr14:9251372 | Bda14g01315 | Bda-Chr14:14727293 | 4.23E-167 | dispersed | |
| Bda14g01063 | Bda-Chr14:9141946 | Bda14g01068 | Bda-Chr14:9251372 | 0 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g01068 | K00083 | - | dcr:108215375 | 603.979 |