Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01078 | ATGGCCGGTGGAGTGGCCGGCGACGGAGAGAGTACTCCCGGACTACTGTTGCTTGACCTTCTTCAAGACGTTATCGGTACCTCGGCTGGGAGAGTCTCCAGCGACATGTTCAAGAAGGACTGTACCGATCTGGTGCGTCGGATCGCTCTCTTAAGCCACTTGTTTGAAGAGATTAGGGATTTGAAGATGGCCGGTGAATTTGGAGCTCCCGATGCGTCGACTTCGTTGCCTTCCTCTTCGAAAACCGCTGCCAAGAAAATAGCATTCCAATTTGAATGTGTTACATGGAAATTAGAGAAAGCATTGGGAAACATACCATTTGATCGATTTGGCATCTCAGAGGAAGTTCAAGAGCAGGTCGAGTTGGTAAGAGCACAATTGAGAAGAGCTGCCAAAAAGTATGGATCACCACCTTCAGTTACACAATCTGTTCTCTCTCAGGACAGAGAAATAAGCATATTATTATCAGAGCATTTGTCAAACGATGTTTCTTTTGAGAATTCGGATGGTATAGATGTTGACATTACTGTGAAGATGGATACTTTTTGCGACAACAATACTTTGATCAGCCGTAGTAATGAACAGAGAACTCAATTGTTGGATAGAACGAGGAATGTTTCTACTTCAGATCTCTCTTCAAATGATGCTAGTGCTGAAGGTCCCGACAACTCAGTAAATGAGAGTGTGGATGAGAACAAGAAGTCTGATGCAAATATTATACCTGACGATTTTTTATGCCCCATATCTCTAGAATTAATGAGAGACCCTGTCATTGTGTCCACAGGACAGACGTATGAAAGATCCTACATTCAAAGATGGATAGATTGTGGCAACACAACATGTCCAAAAACCCAGCAGAAGCTTCAAAATTTAACTCTTACCCCGAATTACGTTCTGAGAAGTCTCATCTCTCAATGGTGCCTGAAGCACAATATTGAACAACCAACAGGATTAACCAATGGAAAAATCAAAAAGTTTGATGGAACATATCGCGATGTTTGTGCTGAAATAGCAGCCATTGAAGCTCTGGTTCGCAAACTCTCTGGCCATTCCCTTGAGGAGCAGAGAGCTGCAGTGACTGAACTGCGATCTCTATCCAAAAGAAGTACAGATAACAGAATACTAATAGCAGAAGCCGGAGCCATTCCAGCTCTAGTCAACCTTTTAACGTCAGACGATGTCTTAATACAAGAGAATGCAGTCACTTCTGTCCTTAACCTTTCAATATATGAAAACAACAAAGGACTCATCATGCTAGCTGGGGCTGTTCCTTCTATTGTCCAGGTTCTTAGGATCGGAAGCATGGAAGCTAGAGAAAATGCAGCTGCTACCCTCTTCAGCCTCTCTCTTGCAGATGAAAACCGGATAATAATTGGCGCATCTGGGGCAATCCCAGCATTGGTAGAATTGCTTCAAAACGGGAGCACGAGAGGTAAGAAAGATGCAGCCACAGCTCTATTCAATTTATGCATTTATCAGGGCAACAAAGGCCGAGCTGTAAGGGCCGGAATTGTCTCGGCCCTGTTGAAGATGCTTACGGACTCAAATTCATGCATGGTCGATGAGGCTCTTACAATAATGTCTGTTCTTGCCAATCATCAAGAAGCAAAAGTTGCCATTGTAAAAGCCAGCACCATACCAGTTTTGATCGACCTCGTGAGGACGAGTTTGCCTCGTAATAAAGAAAATTCTGCTGCCATTTTACTTGCGTTGTGTAAGAGAGATTCCGAGAATCTCGCATGTATCAGTAGGCTTGGAGCCATAATACCACTAACCGAGCTTGCAAGAAGTGGCACGGAAAGAGCGAAAAGGAAAGCTAATTCATTGCTGGAGCATCTTCGAAAAATACAGCAGGATTAG | 1860 | 43.66 | MAGGVAGDGESTPGLLLLDLLQDVIGTSAGRVSSDMFKKDCTDLVRRIALLSHLFEEIRDLKMAGEFGAPDASTSLPSSSKTAAKKIAFQFECVTWKLEKALGNIPFDRFGISEEVQEQVELVRAQLRRAAKKYGSPPSVTQSVLSQDREISILLSEHLSNDVSFENSDGIDVDITVKMDTFCDNNTLISRSNEQRTQLLDRTRNVSTSDLSSNDASAEGPDNSVNESVDENKKSDANIIPDDFLCPISLELMRDPVIVSTGQTYERSYIQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLISQWCLKHNIEQPTGLTNGKIKKFDGTYRDVCAEIAAIEALVRKLSGHSLEEQRAAVTELRSLSKRSTDNRILIAEAGAIPALVNLLTSDDVLIQENAVTSVLNLSIYENNKGLIMLAGAVPSIVQVLRIGSMEARENAAATLFSLSLADENRIIIGASGAIPALVELLQNGSTRGKKDAATALFNLCIYQGNKGRAVRAGIVSALLKMLTDSNSCMVDEALTIMSVLANHQEAKVAIVKASTIPVLIDLVRTSLPRNKENSAAILLALCKRDSENLACISRLGAIIPLTELARSGTERAKRKANSLLEHLRKIQQD | 619 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 9435245 | 9438632 | + | Bda027901.1 | Bda14g01078 | 21129 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01078 | 619 | MobiDBLite | consensus disorder prediction | 194 | 233 | - | - | |
Bda14g01078 | 619 | Gene3D | - | 433 | 517 | IPR011989 | - | |
Bda14g01078 | 619 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 11 | 23 | 616 | - | - | |
Bda14g01078 | 619 | SUPERFAMILY | ARM repeat | 334 | 613 | IPR016024 | - | |
Bda14g01078 | 619 | SMART | Ubox_2 | 243 | 306 | IPR003613 | GO:0004842|GO:0016567 | |
Bda14g01078 | 619 | MobiDBLite | consensus disorder prediction | 194 | 225 | - | - | |
Bda14g01078 | 619 | PANTHER | U BOX DOMAIN-CONTAINING | 23 | 616 | - | - | |
Bda14g01078 | 619 | Pfam | U-box domain | 240 | 311 | IPR003613 | GO:0004842|GO:0016567 | |
Bda14g01078 | 619 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 222 | 313 | IPR013083 | - | |
Bda14g01078 | 619 | SMART | arm_5 | 492 | 532 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | SMART | arm_5 | 369 | 409 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | SMART | arm_5 | 410 | 450 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | SMART | arm_5 | 451 | 491 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | SMART | arm_5 | 533 | 573 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 338 | 380 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | Gene3D | - | 314 | 432 | IPR011989 | - | |
Bda14g01078 | 619 | Pfam | Armadillo/beta-catenin-like repeat | 452 | 490 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | Pfam | Armadillo/beta-catenin-like repeat | 370 | 408 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 462 | 504 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | CDD | RING-Ubox_PUB | 244 | 286 | IPR045210 | - | |
Bda14g01078 | 619 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 380 | 422 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | Coils | Coil | 599 | 619 | - | - | |
Bda14g01078 | 619 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 421 | 463 | IPR000225 | GO:0005515 | |
Bda14g01078 | 619 | Gene3D | - | 518 | 619 | IPR011989 | - | |
Bda14g01078 | 619 | SUPERFAMILY | RING/U-box | 238 | 314 | - | - | |
Bda14g01078 | 619 | Coils | Coil | 113 | 133 | - | - | |
Bda14g01078 | 619 | ProSiteProfiles | U-box domain profile. | 239 | 313 | IPR003613 | GO:0004842|GO:0016567 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00160 | Bda-Chr4:4613513 | Bda14g01078 | Bda-Chr14:9435245 | 2.04E-07 | dispersed | |
Bda04g00184 | Bda-Chr4:5644054 | Bda14g01078 | Bda-Chr14:9435245 | 2.11E-07 | dispersed | |
Bda09g00799 | Bda-Chr9:15390678 | Bda14g01078 | Bda-Chr14:9435245 | 4.82E-07 | dispersed | |
Bda09g01582 | Bda-Chr9:47276754 | Bda14g01078 | Bda-Chr14:9435245 | 9.48E-63 | dispersed | |
Bda14g00363 | Bda-Chr14:2631344 | Bda14g01078 | Bda-Chr14:9435245 | 1.99E-157 | dispersed | |
Bda14g01065 | Bda-Chr14:9155228 | Bda14g01078 | Bda-Chr14:9435245 | 1.25E-09 | dispersed | |
Bda14g01078 | Bda-Chr14:9435245 | Bda15g00313 | Bda-Chr15:5969027 | 8.85E-98 | dispersed | |
Bda14g01078 | Bda-Chr14:9435245 | Bda07g00590 | Bda-Chr7:7230889 | 1.81E-164 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01078 | - | - | csv:101221534 | 844.728 |