Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01130 ATGGGTCTAGTGCCTAACTATGTCGGTGCTTGGAGCGCTGGAAAATCAAAGGGAAGGATGAAAGATGACGAAGATGGGAGGATAGGTTGTTGGATTAAAATGAGATTTTTTAGAAGCTGCATTTCATCGAGATCGAAAGTAGACAGCTCGATAAGTGGCACAAGCACTCAATGTGCAGAAAGTAAGTCCACAATTGATATGAGCGAAGACCAACCAGTTGCACCAGTCCCATCATCTTCAACTACCAGCAATACTGAGAGTGCTCTATCTACTATCAATATAGAAGAAGAACTTAAAATTGCTTCTCAGCTTCGGAAATTTGCTTTTCATGAGCTGAAGTCATCCACAAGAAATTTTAGACCAGAAAGCCTTCTTGGTGAAGGAGGGTTTGGCTGTGTATTCAAGGGTTGGATCAATGAGAATGGATCAACTCCTGTAAAACCTGGCACAGGCCTTGCAGTTGCCGTGAAAACCCTTAATCACGATGGACTTCAGGGTCATAAAGAATGGCTTGCTGAAGTTAATTATCTTGGTGACCTTCTACATCCAAACTTAGTTAAATTAATTGGATATTGTATTGAGGATGATCAGCGGCTTCTAGTTTATGAATTTATGCCTCGAGGAAGTTTGGAGAATCATCTGTTTAGAAGATCACTGCCTCTTCCTTGGTTCATAAGAATGAAAATTGCACTCGGTGCTGCTAAGGGCCTTGCCTTTCTGCATGAGGAAGCTGAGAGGCCTGTAATTTATCGAGATTTTAAGACATCCAATATCTTGTTAGATGCGGATTATAATGCCAAGCTTTCTGATTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACTCACGTGTCAACTCGAGTGATGGGAACTTATGGCTATGCTGCCCCCGAATATGTTATGACAGGACATCTTACATCAAAGAGTGATGTTTATAGTTTTGGGGTTGTGCTGCTTGAGATGCTAACTGGGCGGAGATCCATGGACAAAAACCGACCTAACGGAGAGCATAATTTGGTGGAATGGGCACGCCCACAACTTGGAGAAAGACGAAGGTTTTATCGACTTATCGATCCACGTCTCGAAGGGCGATTCTCAATCAAAGGGGCCCAAAAAGCTATTCAATTGGCTTCCCACTGCCTAAACCGAGACCCAAAAGCCAGACCATTGATGAGTGAAGTCGTTCAAGTGCTCAAGCCTCTGCCCAATCTCAAGGACATGGCCTCTTCTTCCTCCTTCTTCCAAGCCATGCAAATTGACCGTGTGGGGTCTAACTCAAGTAGTAGAAATGGCATTAGAATTCAGCCAGGGTTGTCCCAGAAGGGTCAGCCAATCAGAAGCCTCTCCTTCAGTCCGAATGACTCGCCATATTATCAGGTACTTCCTCACCCGTCTCCTAAGCCTGATTTTCGACCGTAA 1422 44.02 MGLVPNYVGAWSAGKSKGRMKDDEDGRIGCWIKMRFFRSCISSRSKVDSSISGTSTQCAESKSTIDMSEDQPVAPVPSSSTTSNTESALSTINIEEELKIASQLRKFAFHELKSSTRNFRPESLLGEGGFGCVFKGWINENGSTPVKPGTGLAVAVKTLNHDGLQGHKEWLAEVNYLGDLLHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWFIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPRLEGRFSIKGAQKAIQLASHCLNRDPKARPLMSEVVQVLKPLPNLKDMASSSSFFQAMQIDRVGSNSSSRNGIRIQPGLSQKGQPIRSLSFSPNDSPYYQVLPHPSPKPDFRP 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10306558 10310015 + Bda027966.1 Bda14g01130 21181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01130 473 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 53 454 - -
Bda14g01130 473 Pfam Protein kinase domain 122 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda14g01130 473 MobiDBLite consensus disorder prediction 424 473 - -
Bda14g01130 473 MobiDBLite consensus disorder prediction 47 88 - -
Bda14g01130 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Bda14g01130 473 PANTHER OS01G0588500 PROTEIN-RELATED 53 454 - -
Bda14g01130 473 ProSiteProfiles Protein kinase domain profile. 119 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda14g01130 473 CDD STKc_IRAK 125 402 - -
Bda14g01130 473 MobiDBLite consensus disorder prediction 424 459 - -
Bda14g01130 473 Gene3D Phosphorylase Kinase; domain 1 99 204 - -
Bda14g01130 473 SUPERFAMILY Protein kinase-like (PK-like) 105 422 IPR011009 -
Bda14g01130 473 ProSitePatterns Protein kinases ATP-binding region signature. 125 157 IPR017441 GO:0005524
Bda14g01130 473 Gene3D Transferase(Phosphotransferase) domain 1 205 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00267 Bda-Chr1:27218381 Bda14g01130 Bda-Chr14:10306558 8.92E-111 dispersed
Bda03g01442 Bda-Chr3:51911094 Bda14g01130 Bda-Chr14:10306558 3.10E-63 dispersed
Bda05g00273 Bda-Chr5:44333746 Bda14g01130 Bda-Chr14:10306558 1.74E-149 dispersed
Bda11g01235 Bda-Chr11:12856575 Bda14g01130 Bda-Chr14:10306558 0 dispersed
Bda14g00132 Bda-Chr14:916994 Bda14g01130 Bda-Chr14:10306558 5.72E-160 dispersed
Bda14g01130 Bda-Chr14:10306558 Bda12g00531 Bda-Chr12:8335639 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70073 PF00069 Pkinase 1.40E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01130 - - vvi:100853083 755.747