Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01154 ATGACTACTTGTATACCTCATGGAAGCTGCAAACCGAATTACTTTGTGGCTGACTGCAGGGGGCGGGATTTTAGAAAAGCTTCTTTTGCGTCTGGTTTGCCATTCAACCGATACATTCCAAGCGAGCTTTCATGGTCATGTGGGGTATCAAAGTTCTTGTCAATCCAGAGATGTAAAACTTTGCATTGTCCAATAAATGAGAAATGGAAGACCTTCAACACAATCATTTCCTCACGCTTGAGAGATGGCTCAACCAAGTATTTTGATTTTGCTGTCATTGGTAGTGGAGTTGCTGGACTCAGATATGCTCTTGAAGTTGCAAAACATGGATCTGTTGCTGTGATTACCAAGTCTGAGCCACATGAAAGCAACACAAACTATGCTCAAGGTGGTGTCAGTGCCGTTCTTTGCCCCTCAGATTCTGTGGAGAGCCACATGCAGGATACTATTGTAGCAGGGGCCTATCTTTGTGATGAAGAGACAGTCAGGGTTGTGTGTACAGAGGGGCCTGACAGAATAAGAGAGTTGATTGCTATGGGCGCATCATTTGATCACGGGGAGGATGGAAACTTGCATCTAGCAAGAGAGGGGGGCCATTCTCACCACAGGATTGTTCACGCTGCTGATATGACTGGAAGGGAGATTGAGCGAGCCCTTCTTGAAGCAGTTGTCAAGGATCCTAATATATATGTTTTTGAACACCATTTTGCCATTGATTTACTAACTTGTCAGGATGGTGCTGACACTATTTGTCTTGGTGTTGATACTCTGAATGCTGAAACACTGGAGGTAGCACGGTTTATTTCAAAGGTGACTTTGCTTGCTTCCGGTGGAGCTGGACATATCTACCCATCAACTACAAATCCTCCTGTAGCCACTGGCGATGGAATAGCCATGGCACATCGAGCTCAAGCTGTAATTTCCAACATGGAATTCGTGCAGTTCCATCCGACTGCTTTAGCTGACGAGGGCCTTCCCATCCAACCAATCAATGCTCGAGAAAATGCATTTCTCATCACTGAAGCTGTAAGGGGAGATGGAGGTATCTTATATAATCTAAACAAGGAAAGGTTCATGCCTTTTTACGACGAAAGAGCAGAGCTTGCTCCTCGGGATGTCGTGGCTAGAAGCATAGATGACCAGCTAAAAAAACGAAGCGAGAAGTATGTGCTTCTCGATATAAGCCACAAACCAAGAGAAAGTATTCTCTCTCACTTCCCAAACATTGCCTCGGAATGCCTCAAGTATGGCTTGGACATTACTCGTCAGCCAATTCCCGTTGTTCCAGCTGCTCATTATATGTGTGGAGGAGTCCGAGCTGGGCTCCAAGGCGAAACCAACGTGCAAGGCTTGTACGTGGCTGGAGAGGTAGCATGCACTGGCCTGCATGGGGCAAACAGGCTGGCTAGCAACTCATTGCTCGAAGCATTAGTTTTCGCTCGAAGGGCAGTTCAGCCCTCAGTTGATCACATGAAGAGATGTAATACCAATTTCAGTGCTTCAAAATCATGGGCGAGGCCGTTCGTGCCCACATCGCTTAAAATTCATGTTATGGAGAGAATTTTGGCAACGACCAATGAAATCAGAAAGGAATTGCAGTTGATAATGTGGAAATATGTGGGGATTGTTAGATCAACAACGAGGCTAGAGACAGCAGAAAGGAAGATTAGTGAGCTGGAAGCTAAGTGGGAGGACTACTTGTTTTGTCAGGGATGGGGGCCAACTATGGTGGGCCTTGAAGCTTGTGAAATGAGGAATCTGTTTTGTTGTGCAAAGTTGGTGGTGAGCAGTGCTCTTTCTAGGCAGGAAAGCAGAGGCCTCCATTACACCACAGATTTTCCTCATCTCGAAGAAAGTAAGCGCCTTCCGACGATAATTTTTCCTGGCACATTTGTAAAGAGCACGTGGAGTTCCAGACAACTACACCCGCAGCCAACGGTATAG 1944 46.09 MTTCIPHGSCKPNYFVADCRGRDFRKASFASGLPFNRYIPSELSWSCGVSKFLSIQRCKTLHCPINEKWKTFNTIISSRLRDGSTKYFDFAVIGSGVAGLRYALEVAKHGSVAVITKSEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDEETVRVVCTEGPDRIRELIAMGASFDHGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVKDPNIYVFEHHFAIDLLTCQDGADTICLGVDTLNAETLEVARFISKVTLLASGGAGHIYPSTTNPPVATGDGIAMAHRAQAVISNMEFVQFHPTALADEGLPIQPINARENAFLITEAVRGDGGILYNLNKERFMPFYDERAELAPRDVVARSIDDQLKKRSEKYVLLDISHKPRESILSHFPNIASECLKYGLDITRQPIPVVPAAHYMCGGVRAGLQGETNVQGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSVDHMKRCNTNFSASKSWARPFVPTSLKIHVMERILATTNEIRKELQLIMWKYVGIVRSTTRLETAERKISELEAKWEDYLFCQGWGPTMVGLEACEMRNLFCCAKLVVSSALSRQESRGLHYTTDFPHLEESKRLPTIIFPGTFVKSTWSSRQLHPQPTV 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10715336 10718582 + Bda027999.1 Bda14g01154 21205

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01154 647 Gene3D - 518 634 - -
Bda14g01154 647 PANTHER L-ASPARTATE OXIDASE, CHLOROPLASTIC 77 642 - -
Bda14g01154 647 SUPERFAMILY FAD/NAD(P)-binding domain 85 507 IPR036188 -
Bda14g01154 647 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 310 434 IPR027477 -
Bda14g01154 647 PANTHER L-ASPARTATE OXIDASE 77 642 IPR005288 GO:0008734|GO:0009435
Bda14g01154 647 TIGRFAM nadB: L-aspartate oxidase 88 614 IPR005288 GO:0008734|GO:0009435
Bda14g01154 647 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 320 442 IPR027477 -
Bda14g01154 647 Gene3D - 89 483 IPR036188 -
Bda14g01154 647 PRINTS FAD-dependent pyridine nucleotide reductase signature 90 109 - -
Bda14g01154 647 PRINTS FAD-dependent pyridine nucleotide reductase signature 436 458 - -
Bda14g01154 647 Coils Coil 542 562 - -
Bda14g01154 647 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 525 623 IPR037099 GO:0016491
Bda14g01154 647 Pfam FAD binding domain 89 473 IPR003953 -
Bda14g01154 647 Pfam Fumarate reductase flavoprotein C-term 529 617 IPR015939 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01154 K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] - qsu:111996822 1079.32
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda10g00132 Bda14g01154 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g01044 Bda-Chr4:61312573 Bda14g01154 Bda-Chr14:10715336 1.43E-128 dispersed
Bda12g00518 Bda-Chr12:7758247 Bda14g01154 Bda-Chr14:10715336 0 dispersed
Bda13g00757 Bda-Chr13:9162420 Bda14g01154 Bda-Chr14:10715336 9.90E-64 dispersed
Bda12g00517 Bda-Chr12:7603065 Bda14g01154 Bda-Chr14:10715336 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g958 . . . Bda10g00132 . . . Bma15g01000 Cmo04g00839 . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag1616 Cone9ag1541 . . Chy07g01293 . . Blo06g00133 . Bda14g01154 Bpe10g00117 . . . . . . . . . . . Cpe14g00560 . . . . . . . Cla07g00870 Cam07g0941 Cec07g1008 Cco07g0987 Clacu07g0917 Cmu07g0916 Cre07g1287 Lsi07g00203 Csa04g00508 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004961 3 1 1 3 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 3 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g01154 Bda_Chr14 FPKM 22.290976 17.691204 0.0 0.0 0.0 0.0 0.0 0.859382 0.654435