Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01169 ATGGCTTCTTCTTCAAACTATTCGAATTCTCCATGTGCCGCCTGTAAGTTCTTGAGGAGAAAATGCTTGCCACATTGCATTTTCGCCCCATATTTCCCTCCTGAAGAGCCACAGAAATTTGTGAATGTTCACAAAATATTTGGAGCAAGTAATGTGAGTAAGCTTCTGAATGAAGTCCTACCTCATCAGAGAGAAGATGCAGTAAATTCTCTTGCGTATGAAGCAGAAGCCAGAATCAAAGATCCAGTCTATGGCTGCGTTGGAGCCATTTCAATCCTGCAAAAGCAAGTTCTTCGCCTGAAGAAAGAGTTAGACGCCACAAATGCAGATCTGATAAGGTATGCCTATAATGAATTACCCACTTCTCAGTTCGGAAGGAGATTCGGCCATGATTCAAGTCTGTTTTTCTCTCCTCCGGCAAACAATGGCGGATATGGAGATACCCATCAGAAAGGAGATGAAGGGACATGA 471 43.1 MASSSNYSNSPCAACKFLRRKCLPHCIFAPYFPPEEPQKFVNVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISILQKQVLRLKKELDATNADLIRYAYNELPTSQFGRRFGHDSSLFFSPPANNGGYGDTHQKGDEGT 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11021002 11021472 - Bda028017.1 Bda14g01169 21220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01169 156 Coils Coil 90 110 - -
Bda14g01169 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 123 - -
Bda14g01169 156 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Bda14g01169 156 PANTHER PROTEIN LATERAL ORGAN BOUNDARIES 4 123 - -
Bda14g01169 156 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g00187 Bda-Chr14:1337488 Bda14g01169 Bda-Chr14:11021002 4.25E-46 dispersed
Bda14g01169 Bda-Chr14:11021002 Bda15g00546 Bda-Chr15:8519291 7.27E-74 dispersed
Bda14g01169 Bda-Chr14:11021002 Bda01g01103 Bda-Chr1:45777636 3.98E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17102 PF03195 LOB 4.70E-41 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01169 - - jre:109021641 245.743