Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01176 ATGGGATCCTGTAATGGTTATTACTCAGCTGGAGAGTTTGATTTTGATACCAAATGGCTGATTGATCCAAAGCATCTTTTTGTTGGCCCTAAAATTGGGGAGGGTGCGCATGCTAAAGTGTACGAGGGAAAATACAAAAACCAAAATGTTGCTGTCAAGGTAGTTCACAAAGGAGAAACTCCGGAAGAAATTTCCAAAAGGGAAGCAAGGTTTGCGAGAGAAATATCAATGTTATCCAGAGTTCAGCACAAGAATCTAGTGAAGTTTATTGGTGCTTGCAAGGAACCGGTCATGGTGATAGTGACAGAGCTTCTGTTGGGAGGTACACTGAGGAAATACTTGCTGAATATGAGGCCCAGGTGCTTGGAAATGCCCGTGGCAGTTGGCTTTGCTCTTGATATTGCCCGTGGAATGGAATGCTTACACTCCCATGGAATCATTCATCGTGACTTGAAACCTGAGAACTTAATCTTGACTGCAGATCATACAACTGTTAAACTGGCCGATTTTGGGCTTGCTAGGGAAGAGTCAGTTACTGAGATGATGACAGCTGAGACAGGAACATACCGGTGGATGGCTCCCGAGCTTTACAGCACAGTCACTTTAAGGCATGGAGAGAAGAAACATTACAACCACAAGGTGGATGTATATAGCTTTGCAATTGTGTTGTGGGAGCTCATCCATAATAAATTACCTTTTGAAGGCATGTCCAATCTACAAGCAGCATACGCAGCTGCTTTTAAGAATACAAGACCAAATGCCGAAAACCTTCCTGAGGATTTGGCATCCATCGTGACTTCATGTTGGAAAGAGGATCCGAATTCCCGCCCTAATTTCAGCCAAATCATACAGAAGCTTCTGCACTATTTCTCAAGCATTTCACCTCCAGAGCCTATCATTCCACCACGGCTACGGACATCGGAAAATGCCGTGCTCCCACCAGAGTCTCCGGGCACAAGTTCTCTCATGGCTGCAAGAGATGACTCAGCAGACGCAGCAAGTGGCAAAATGGAAGTAAAATCAAAAGGTTTTTTTCTCTGCTTTAACCACTGCTACTGA 1059 44.48 MGSCNGYYSAGEFDFDTKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQNVAVKVVHKGETPEEISKREARFAREISMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLEMPVAVGFALDIARGMECLHSHGIIHRDLKPENLILTADHTTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNTRPNAENLPEDLASIVTSCWKEDPNSRPNFSQIIQKLLHYFSSISPPEPIIPPRLRTSENAVLPPESPGTSSLMAARDDSADAASGKMEVKSKGFFLCFNHCY 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11240606 11243196 + Bda028028.1 Bda14g01176 21227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01176 352 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Bda14g01176 352 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Bda14g01176 352 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Bda14g01176 352 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Bda14g01176 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Bda14g01176 352 CDD STKc_MAP3K-like 32 286 - -
Bda14g01176 352 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Bda14g01176 352 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Bda14g01176 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Bda14g01176 352 SUPERFAMILY Protein kinase-like (PK-like) 18 310 IPR011009 -
Bda14g01176 352 PANTHER PROTEIN KINASE ATN1 1 329 - -
Bda14g01176 352 Gene3D Transferase(Phosphotransferase) domain 1 107 295 - -
Bda14g01176 352 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda14g01176 352 PANTHER SERINE-THREONINE PROTEIN KINASE 1 329 - -
Bda14g01176 352 ProSiteProfiles Protein kinase domain profile. 26 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01176 Bda-Chr14:11240606 Bda09g01013 Bda-Chr9:40133049 1.62E-76 dispersed
Bda14g01176 Bda-Chr14:11240606 Bda05g00905 Bda-Chr5:57553100 1.99E-153 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70075 PF07714 PK_Tyr_Ser-Thr 1.30E-60 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01176 - - mnt:21403469 621.698