Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01176 | ATGGGATCCTGTAATGGTTATTACTCAGCTGGAGAGTTTGATTTTGATACCAAATGGCTGATTGATCCAAAGCATCTTTTTGTTGGCCCTAAAATTGGGGAGGGTGCGCATGCTAAAGTGTACGAGGGAAAATACAAAAACCAAAATGTTGCTGTCAAGGTAGTTCACAAAGGAGAAACTCCGGAAGAAATTTCCAAAAGGGAAGCAAGGTTTGCGAGAGAAATATCAATGTTATCCAGAGTTCAGCACAAGAATCTAGTGAAGTTTATTGGTGCTTGCAAGGAACCGGTCATGGTGATAGTGACAGAGCTTCTGTTGGGAGGTACACTGAGGAAATACTTGCTGAATATGAGGCCCAGGTGCTTGGAAATGCCCGTGGCAGTTGGCTTTGCTCTTGATATTGCCCGTGGAATGGAATGCTTACACTCCCATGGAATCATTCATCGTGACTTGAAACCTGAGAACTTAATCTTGACTGCAGATCATACAACTGTTAAACTGGCCGATTTTGGGCTTGCTAGGGAAGAGTCAGTTACTGAGATGATGACAGCTGAGACAGGAACATACCGGTGGATGGCTCCCGAGCTTTACAGCACAGTCACTTTAAGGCATGGAGAGAAGAAACATTACAACCACAAGGTGGATGTATATAGCTTTGCAATTGTGTTGTGGGAGCTCATCCATAATAAATTACCTTTTGAAGGCATGTCCAATCTACAAGCAGCATACGCAGCTGCTTTTAAGAATACAAGACCAAATGCCGAAAACCTTCCTGAGGATTTGGCATCCATCGTGACTTCATGTTGGAAAGAGGATCCGAATTCCCGCCCTAATTTCAGCCAAATCATACAGAAGCTTCTGCACTATTTCTCAAGCATTTCACCTCCAGAGCCTATCATTCCACCACGGCTACGGACATCGGAAAATGCCGTGCTCCCACCAGAGTCTCCGGGCACAAGTTCTCTCATGGCTGCAAGAGATGACTCAGCAGACGCAGCAAGTGGCAAAATGGAAGTAAAATCAAAAGGTTTTTTTCTCTGCTTTAACCACTGCTACTGA | 1059 | 44.48 | MGSCNGYYSAGEFDFDTKWLIDPKHLFVGPKIGEGAHAKVYEGKYKNQNVAVKVVHKGETPEEISKREARFAREISMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLEMPVAVGFALDIARGMECLHSHGIIHRDLKPENLILTADHTTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRHGEKKHYNHKVDVYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNTRPNAENLPEDLASIVTSCWKEDPNSRPNFSQIIQKLLHYFSSISPPEPIIPPRLRTSENAVLPPESPGTSSLMAARDDSADAASGKMEVKSKGFFLCFNHCY | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 11240606 | 11243196 | + | Bda028028.1 | Bda14g01176 | 21227 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01176 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 214 | 236 | IPR001245 | GO:0004672|GO:0006468 | |
Bda14g01176 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 257 | 279 | IPR001245 | GO:0004672|GO:0006468 | |
Bda14g01176 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 140 | 158 | IPR001245 | GO:0004672|GO:0006468 | |
Bda14g01176 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 102 | 115 | IPR001245 | GO:0004672|GO:0006468 | |
Bda14g01176 | 352 | ProSitePatterns | Protein kinases ATP-binding region signature. | 32 | 53 | IPR017441 | GO:0005524 | |
Bda14g01176 | 352 | CDD | STKc_MAP3K-like | 32 | 286 | - | - | |
Bda14g01176 | 352 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 105 | - | - | |
Bda14g01176 | 352 | Pfam | Protein tyrosine and serine/threonine kinase | 29 | 286 | IPR001245 | GO:0004672|GO:0006468 | |
Bda14g01176 | 352 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672|GO:0006468 | |
Bda14g01176 | 352 | SUPERFAMILY | Protein kinase-like (PK-like) | 18 | 310 | IPR011009 | - | |
Bda14g01176 | 352 | PANTHER | PROTEIN KINASE ATN1 | 1 | 329 | - | - | |
Bda14g01176 | 352 | Gene3D | Transferase(Phosphotransferase) domain 1 | 107 | 295 | - | - | |
Bda14g01176 | 352 | SMART | serkin_6 | 26 | 290 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda14g01176 | 352 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 329 | - | - | |
Bda14g01176 | 352 | ProSiteProfiles | Protein kinase domain profile. | 26 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda14g01176 | Bda-Chr14:11240606 | Bda09g01013 | Bda-Chr9:40133049 | 1.62E-76 | dispersed | |
Bda14g01176 | Bda-Chr14:11240606 | Bda05g00905 | Bda-Chr5:57553100 | 1.99E-153 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
70075 | PF07714 | PK_Tyr_Ser-Thr | 1.30E-60 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01176 | - | - | mnt:21403469 | 621.698 |