Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01185 | ATGAAGATGAAGAAGATAAAGGTGAGGAGGAAGGTGAGAGAGCCTAGGTTTTGTTTCAAGACCATGAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATACGGACAAAAAGTGGTAAAGAACACACAGCATCCCAGGAGCTACTACCGATGCACTCAGGACAACTGTCGGGTAAAAAAAAGGGTAGAGCGACTGGCCGAAGACCCAAGAATGGTGATCACGACGTACGAGGGTCGACACCCCCATTCTCCGTCTCAAGAATTGGAAGACTCACAAGCTCCTCATATGAACACTTTCTTATGGTAG | 315 | 46.35 | MKMKKIKVRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHPHSPSQELEDSQAPHMNTFLW | 104 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 11728735 | 11729893 | - | Bda028043.1 | Bda14g01185 | 21236 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01185 | 104 | Pfam | WRKY DNA -binding domain | 29 | 85 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda14g01185 | 104 | ProSiteProfiles | WRKY domain profile. | 23 | 88 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda14g01185 | 104 | MobiDBLite | consensus disorder prediction | 79 | 104 | - | - | |
Bda14g01185 | 104 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 96 | IPR044810 | GO:0003700 | |
Bda14g01185 | 104 | MobiDBLite | consensus disorder prediction | 90 | 104 | - | - | |
Bda14g01185 | 104 | SUPERFAMILY | WRKY DNA-binding domain | 20 | 87 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda14g01185 | 104 | PANTHER | WRKY TRANSCRIPTION FACTOR 13-RELATED | 1 | 96 | - | - | |
Bda14g01185 | 104 | Gene3D | WRKY domain | 15 | 81 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda14g01185 | 104 | SMART | WRKY_cls | 28 | 87 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01358 | Bda-Chr11:15805064 | Bda14g01185 | Bda-Chr14:11728735 | 5.51E-67 | dispersed | |
Bda14g01185 | Bda-Chr14:11728735 | Bda02g00076 | Bda-Chr2:2990854 | 2.24E-33 | dispersed | |
Bda14g01185 | Bda-Chr14:11728735 | Bda13g00224 | Bda-Chr13:2849666 | 9.92E-34 | transposed | |
Bda14g01185 | Bda-Chr14:11728735 | Bda05g00405 | Bda-Chr5:49364112 | 1.35E-33 | transposed | |
Bda14g01185 | Bda-Chr14:11728735 | Bda11g00494 | Bda-Chr11:5270703 | 1.19E-33 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17103 | PF03106 | WRKY | 1.50E-25 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01185 | - | - | tcc:18611706 | 194.897 |