Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01207 ATGGAAAGCGGTTTTGGACAATCAACAAGCGTGCCACCACAAAATCCGTCTTGTTCAAGAAATAATAGCAATGATGCAGGCGATTTTGAGTGCAATATTTGCTTTGAATTGCCTCAAGACCCCATTGTTACTCTCTGTGGACATCTCTTTTGCTGGCCTTGCTTGTACAGATGGCTGCATCATCATTCTCATTCTCAAGAATGCCCAGTTTGTAAGGCTCTTGTTCAGGAAGATAAGTTGGTTCCTCTCTACGGCAGGGGCAAAACTCAGACTGATCCGAGATCGAAATCATATCCTCAGTTTGATATTCCCAATCGCCCGGCTGGTCAACGACCAGAAACCGCTCCTCCACCAATGTCAAACCAGTTCACTAATTACGGGTTTGGATTAACAGGTGGTTTTGCACCAGCAACTACTGCAAGAATCAGGTAA 432 44.91 MESGFGQSTSVPPQNPSCSRNNSNDAGDFECNICFELPQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKALVQEDKLVPLYGRGKTQTDPRSKSYPQFDIPNRPAGQRPETAPPPMSNQFTNYGFGLTGGFAPATTARIR 143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12051870 12052301 + Bda028065.1 Bda14g01207 21258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01207 143 ProSitePatterns Zinc finger RING-type signature. 46 55 IPR017907 -
Bda14g01207 143 ProSiteProfiles Zinc finger RING-type profile. 31 72 IPR001841 -
Bda14g01207 143 PANTHER RING ZINC FINGER PROTEIN-RELATED 2 142 - -
Bda14g01207 143 MobiDBLite consensus disorder prediction 1 21 - -
Bda14g01207 143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 85 IPR013083 -
Bda14g01207 143 SMART ring_2 31 71 IPR001841 -
Bda14g01207 143 MobiDBLite consensus disorder prediction 85 116 - -
Bda14g01207 143 CDD RING-HC_AtRMA_like 29 73 - -
Bda14g01207 143 SUPERFAMILY RING/U-box 27 84 - -
Bda14g01207 143 Pfam Zinc finger, C3HC4 type (RING finger) 29 76 - -
Bda14g01207 143 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 2 142 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda10g00322 Bda14g01207 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00322 Bda-Chr10:33200560 Bda14g01207 Bda-Chr14:12051870 4.39E-83 dispersed
Bda14g01207 Bda-Chr14:12051870 Bda07g00293 Bda-Chr7:4041845 2.96E-29 dispersed
Bda14g01207 Bda-Chr14:12051870 Bda01g00547 Bda-Chr1:32387548 7.78E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01207 K10666 - qsu:112032934 271.937