Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01210 ATGCTCGAAAATCTTACGATATGGCAATTAGTCGAAGATTTGAATCCATCCCTCAAACCGAATTCAATTCACGTAGGTGACGAAGTAATTTTTCCTTTGTTCTGCAAATGTCCTTCACAGAAAGACAAGGAAAATGGCATTAATTATCTGATTACTTATGTATGGCAGCCCAAGGATGATGTGCTGCAAGTAAGTAACAAGTTTAATTCTTCTCCTTTTGATATTCTTAATGAAAATAAGTATCAAAGTATGGATTCTGCTGTCAACCTTCCTGTTATGATCCCGGTTTCGGCTTTACCGAACCTTTCTCAGTCGTTTACTTTCCCGGAAAATATGAAAAATGGAAACAGATCGATTCTGATCTACGTGGGAAGTTTTGGAGGTGTTTTGATTTTTGCTGTTGTAATTGGGTTGATTTGTTTTGGTAGATCATTAAGGAAAAATAAGTCCTTCAAGTGGAAGGATTCTTCTTTGGAAATTTCTGTTGTGATGAATGAAGATCCTGAAAATCAAATCTTGAAGCCTAAAGCAATGCAAGATAAGTTACTTTCCGTCGTTTCGGATTCTCTCGGAAAGCCGGTTTTGTATGAAAGTAAAACAATTTCAGAGGCTACGATGAACTTCAACGAAAGTTGCAGAATCGGAGGATTTGTATACAGGGCCGCCATTAATGGACAAATCTTAGCAGTGAAGAGCGGACAGGAAGATATCACAGAAGAAGTCAAGATTTTGCAGAAAGTCAATCACGTGAATCTTGTAAAATTGATGGGATTTTCTCCCAACATTGATGGGAATTGTATTCTGGTCTATGAATATGCAGAAAATGGTTCACTAGATAAATGGCTGTTCTCAAATTCTGCAGTTTCTTCAAGCTTTCAAGGATGTCTTCCATGGAGTCGCAGGCTGCAAATCGCGCTGGACGTAGCGAACGGCCTGCATTACATGCACGAACACGTTCGCCCCAACATCGTTCACCGAGATTTAAGATCAGAAAACGTACTTTTGGACTCTGATTTCAAGGCCAAAATAGCAAATTTCTCCACCGCCAAGCCTGCGACAGCCTCAGTTTCGCCAAAAGTTGATATTCTGGCATTCGGGATTGTTCTTCTGGAGCTGCTTTCCGGGAAGAAAGCGGTGGGAGCGAAAGAGAACGGCGAGATGGTGATGGCGTGGAAGGAAATAAGGGGAGTGTTGGAAATGGAGGAAGAAAGAGAAGAAAGGTTGAGCAAATGGATGGATCCAAAGCTGGGAGGCTCTTACTCCATTAATGGAGCTTTGAGCTTGGCGGGTTTGGCTAAAGCTTGCACGTCGGATCTGCCATTGGCAAGGCCTAGCATTTCAGAGATCGTGTTTAATCTTTCTGTTCTCGTTCAATCTGCCAATGTTTTTGCGCAGAAATCTTGGGTTTTTGGATTGGAAGTCGAAGTCGGTCAGCGTCTCAATCCCCTCTCACCTCGCTGA 1461 42.03 MLENLTIWQLVEDLNPSLKPNSIHVGDEVIFPLFCKCPSQKDKENGINYLITYVWQPKDDVLQVSNKFNSSPFDILNENKYQSMDSAVNLPVMIPVSALPNLSQSFTFPENMKNGNRSILIYVGSFGGVLIFAVVIGLICFGRSLRKNKSFKWKDSSLEISVVMNEDPENQILKPKAMQDKLLSVVSDSLGKPVLYESKTISEATMNFNESCRIGGFVYRAAINGQILAVKSGQEDITEEVKILQKVNHVNLVKLMGFSPNIDGNCILVYEYAENGSLDKWLFSNSAVSSSFQGCLPWSRRLQIALDVANGLHYMHEHVRPNIVHRDLRSENVLLDSDFKAKIANFSTAKPATASVSPKVDILAFGIVLLELLSGKKAVGAKENGEMVMAWKEIRGVLEMEEEREERLSKWMDPKLGGSYSINGALSLAGLAKACTSDLPLARPSISEIVFNLSVLVQSANVFAQKSWVFGLEVEVGQRLNPLSPR 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12070710 12072170 - Bda028068.1 Bda14g01210 21261

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01210 486 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 3 464 - -
Bda14g01210 486 ProSiteProfiles Protein kinase domain profile. 130 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda14g01210 486 Gene3D Transferase(Phosphotransferase) domain 1 273 354 - -
Bda14g01210 486 Gene3D Transferase(Phosphotransferase) domain 1 355 466 - -
Bda14g01210 486 SUPERFAMILY Protein kinase-like (PK-like) 203 453 IPR011009 -
Bda14g01210 486 Gene3D Phosphorylase Kinase; domain 1 187 272 - -
Bda14g01210 486 SMART tyrkin_6 206 453 IPR020635 GO:0004713|GO:0006468
Bda14g01210 486 Pfam Protein tyrosine and serine/threonine kinase 232 350 IPR001245 GO:0004672|GO:0006468
Bda14g01210 486 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 464 - -
Bda14g01210 486 ProSitePatterns Tyrosine protein kinases specific active-site signature. 323 335 IPR008266 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01210 - - - jre:109002275 507.294
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00607 Bda-Chr11:6171112 Bda14g01210 Bda-Chr14:12070710 3.38E-76 dispersed
Bda14g01210 Bda-Chr14:12070710 Bda04g00317 Bda-Chr4:47007325 1.10E-54 dispersed
Bda14g01210 Bda-Chr14:12070710 Bda13g00584 Bda-Chr13:6873767 4.44E-49 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g904 . . . . . . . . . . . Cma07g00748 . Car07g00735 . . . . . . . . . . . . . . . . . . . Cone6ag1353 . Lsi01g01045 . . . . . . Bda14g01210 . . . . . . Cmo07g00769 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002802 1 2 1 0 0 1 2 2 2 2 2 1 2 2 2 2 1 2 2 1 2 2 1 1 0 2 2 1 1 1 43
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70079 PF07714 PK_Tyr_Ser-Thr 3.60E-21 CL0016 Bda PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g01210 Bda_Chr14 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0