Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01214 ATGGAAGTAGCGAAACCTCCGTTTCCACCTATTTTGTCCATCTACAAAGATCAGCGCAATTCTTTATATTCCTCGGTGATTTCTATGTCCCAAGATTATCATCAACACCGAAGCTTCTTCGGTTTCTCTAATGGGTTCGAGAAATCAGCAGCATCGGCGACGCACCTCCAAGAACATCAGATCCGGCGAGATAATGGCGGATTGGTTGGTGTCGAAGAAGAGCCAGGCGGCTTGCACGTGTATGAGACCGCCGGAATGTTATCAGAATTATTCAATTTCCATCCGGTCACCACAGCCGCTGCGGAATTACTAGAACCACAGATGATAATGGCAAATTCTCGGCAACCAAATCTGCAGCCGCCATCAACCGGCCTGACCACCGACTGGTATGGAGAGAGATCAATACAGTTGGGTGACTCAAAGACCCATTCTATCATAACTCACAACCACCATAATCCGATTACTGCCATTAATGCAGACCCAGCAGCTGCCATGCAGCTTTTTCTGATGAATCCGCAGCCGAGATCGTCGTCTTCTACTCATCCCCCTCCATCAACTTCCTCTACCCTCCACATACTTCAAGGTTTCGCTTCTTCTGATGCTCCAACAGAAGAAACTTCTGGTCAATTCTCATGGCTTCCTGATGGTTCTCATGGCGGAACAGCTCGATCTTCTTCCCATGGCCTTTCGTTATCCTTATCGTCTTCTTTGCAACAGCTAGAAGCATCAAAGGCTGATGATTTCAGAATGGGAGATACTGGAAACTTACTGTATTACAATCACGGTGGAAGTGGAAGTGGTCCGACCCAGCAAGTTCATTTTGGGTTTGGGTCATCGTTATCCATCGTCAATGTCTTGAGGAATTCAAAGTACGCAAGGGCTACCCAAGAATTGCTGGAAGAATTTTGCAGCGTCGGTAGAGGTCAGTTTAAGAAGAGCAAATTAGGTCGGAATAACTCCGACGTTAGCTCGAATCCAGCAATTGCCGGTGCCGGCGGCTCTTCATCTTCTTCAAAGGACCTTCCTCCGTTGTCCGCTTCCGATCGGATTGAACACCAAAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGATAGGCGATATAGCCAGTACTGCGAACAAATGCAAATGATGGTTAATTCGTTTGATTTGGTGATGGGGTTTGGCGCTGCAGCCCCATACACAATGCTAGCACAGAAGGCGATGTCTCGCCATTTCCGGTGCCTGAAAGACGGGATAACGGCGCAGTTGAAGCACAGCTGCGATTTGCTGGGGGAGAAAGACGGCGGGAAAGGGTCGGGAATCACGAAGGGGGAGACCCCGAGACTGAAAATGCTCGAGCAAAGCTTAAGGCAGCAAAGAGCTTTTCACCAAATTGGTATGGTCGAACAAGAGGCTTGGCGGCCTCAACGTGGCTTGCCTGAACGTTCTGTCAACATTTTGAGATCATGGCTTTTCGAGCATTTTCTTCACCCGTATCCAAGCGACGCAGATAAGCATCTATTGGCAAGACAGACTGGTTTATCAAGAAATCAGGTCTCAAACTGGTTCATCAATGCCAGGGTTAGACTGTGGAAACCAATGGTGGAAGATATGTATCAGCAAGAAGCCAAAGATGCAGATGAACATTGTGAGGACCACGAAGAAGAGGAAGAAGAAGAAGTTGGGAAAGAAAGAGAAGAAATTAAGAAGAAAAAAAATGGGGTAACACAAACTACAATGCCAACAGCCAAAAAATCCCACATTAATGCCTCAGAAAACGACCCTTCAATCAACACCCAGCCCTTCTCGGAAAACCAAGCATCGCAACCCATCACCACCGCCCTTGCCGGACCAGTGGAGCAGCTGTGTTTTCCGGCGACGATTGATCTGCACGACACGTATCGGCTCAGAAGCATCGTGGCAGCTGATTATGGGACCAGTTCTGCAAATGCTGAGGTTGTAGGGCCAACCCTTGTAAGATATGGGACCACGGCCGGTGATGTTTCTCTCACTTTAGGTCTCCGCCATGCCGGAAACATGCCGGATAAGAGCGCTCCTTTTAGTATTACAGATTTTGGGGGATGTTAG 2076 48.12 MEVAKPPFPPILSIYKDQRNSLYSSVISMSQDYHQHRSFFGFSNGFEKSAASATHLQEHQIRRDNGGLVGVEEEPGGLHVYETAGMLSELFNFHPVTTAAAELLEPQMIMANSRQPNLQPPSTGLTTDWYGERSIQLGDSKTHSIITHNHHNPITAINADPAAAMQLFLMNPQPRSSSSTHPPPSTSSTLHILQGFASSDAPTEETSGQFSWLPDGSHGGTARSSSHGLSLSLSSSLQQLEASKADDFRMGDTGNLLYYNHGGSGSGPTQQVHFGFGSSLSIVNVLRNSKYARATQELLEEFCSVGRGQFKKSKLGRNNSDVSSNPAIAGAGGSSSSSKDLPPLSASDRIEHQRRKVKLLSMLDEVDRRYSQYCEQMQMMVNSFDLVMGFGAAAPYTMLAQKAMSRHFRCLKDGITAQLKHSCDLLGEKDGGKGSGITKGETPRLKMLEQSLRQQRAFHQIGMVEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQEAKDADEHCEDHEEEEEEEVGKEREEIKKKKNGVTQTTMPTAKKSHINASENDPSINTQPFSENQASQPITTALAGPVEQLCFPATIDLHDTYRLRSIVAADYGTSSANAEVVGPTLVRYGTTAGDVSLTLGLRHAGNMPDKSAPFSITDFGGC 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12216414 12220509 + Bda033967 Bda14g01214 21265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01214 691 SUPERFAMILY Homeodomain-like 470 536 IPR009057 -
Bda14g01214 691 Pfam Associated with HOX 285 416 IPR006563 -
Bda14g01214 691 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 70 678 - -
Bda14g01214 691 ProSiteProfiles 'Homeobox' domain profile. 466 529 IPR001356 GO:0003677
Bda14g01214 691 MobiDBLite consensus disorder prediction 313 343 - -
Bda14g01214 691 CDD homeodomain 469 530 IPR001356 GO:0003677
Bda14g01214 691 Pfam Homeobox KN domain 486 525 IPR008422 GO:0003677|GO:0006355
Bda14g01214 691 MobiDBLite consensus disorder prediction 570 587 - -
Bda14g01214 691 MobiDBLite consensus disorder prediction 312 348 - -
Bda14g01214 691 Gene3D - 472 534 - -
Bda14g01214 691 SMART prehox3 280 417 IPR006563 -
Bda14g01214 691 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 70 678 - -
Bda14g01214 691 SMART HOX_1 469 533 IPR001356 GO:0003677
Bda14g01214 691 MobiDBLite consensus disorder prediction 542 587 - -
Bda14g01214 691 Coils Coil 532 570 - -
Bda14g01214 691 MobiDBLite consensus disorder prediction 200 228 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00315 Bda14g01214 CCT
Bda04g00315 Bda14g01214 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00315 Bda-Chr4:46953423 Bda14g01214 Bda-Chr14:12216414 0 dispersed
Bda05g01130 Bda-Chr5:59513484 Bda14g01214 Bda-Chr14:12216414 5.99E-85 dispersed
Bda07g00489 Bda-Chr7:6125759 Bda14g01214 Bda-Chr14:12216414 1.48E-89 dispersed
Bda14g01214 Bda-Chr14:12216414 Bda09g00034 Bda-Chr9:536688 3.26E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17105 PF07526 POX 8.20E-49 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01214 - - vvi:100261554 735.332