Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01228 ATGTCATCGTCGAATTCTCCGTGCGCGGCCTGCAAGGTACGGAGGTGTAAATGCACGCAAGAGTGTGTATTCGCACCGTATTTTCCATCAGATCAGCCTCAGAAATTCGCAAATGTCCACAACGTGTTCGGCGCAAGCAACGTGGCCAAGCTGCTCAACGAACTCGACGCTAGGCACCGGGAAGACGCAGTCAACTCTCTGGCTTACGAGGCCGAGTTTCGCCTCCGAGACCCAGTCTACGGTTGCGTCGGTCTGATCTCCATCCTTCAGCACAGACTGAAGCAAATGCAAAGCGATCTCATCAACGCCAAAAAAGAGTTAGCCACCTACATTGGGCCTCAGGCAATGCTTCCTGTAATGCAACCTTCAGGGATGATGATGGCTCAACAACAACAACATCCAGGCAATCCTTCGTCTTCCTCCATAATGCCTTATAACATGCAGCCCATGATGAGTATCCCGGCTGGTCCTTCCGGGCAAATGATGATTCGTGAGCCTCACCAACAACAGCATCAACACCAGCTTCATCAGCAACAGTTGTTTGAGGCTCAGCAATTGGCCGCAGCCGTAGCGGCTAGAGAGCAGCAAGATATGTTTAGTGCTTTCGAGCCAAAAGAACAACAAATGGACCCCCGCCATCATCATCCCCAACAGCAGCAGCAAGAGCTTTTACGGTTACATAATGGGTTCGACCCATCTCCGGTATCCGCCAGTGGGTTTAATCAGCTGAACAACGCTTCTGCTTTGTCCCCTTCTTTGGCCCTGGGCACTTTCGATAATGCATACCACCTTCAACCAGAGATTTCAGAGCATCCTCACTCCCATTATCATCATCAACAGCAGCAACAGCAGCAACAGCTTCAGGCTCAGCCTTTGCTCCAACCACAGCAGCAGCCACAACCACCCACCCAATCCCAGCTTTTGCAGCGGCAAAAGGCAGATAGCGAGAACGACAGAATCATGGGTCCCTCTGGTTAG 978 51.64 MSSSNSPCAACKVRRCKCTQECVFAPYFPSDQPQKFANVHNVFGASNVAKLLNELDARHREDAVNSLAYEAEFRLRDPVYGCVGLISILQHRLKQMQSDLINAKKELATYIGPQAMLPVMQPSGMMMAQQQQHPGNPSSSSIMPYNMQPMMSIPAGPSGQMMIREPHQQQHQHQLHQQQLFEAQQLAAAVAAREQQDMFSAFEPKEQQMDPRHHHPQQQQQELLRLHNGFDPSPVSASGFNQLNNASALSPSLALGTFDNAYHLQPEISEHPHSHYHHQQQQQQQQLQAQPLLQPQQQPQPPTQSQLLQRQKADSENDRIMGPSG 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12457879 12458856 - Bda028093.1 Bda14g01228 21279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01228 325 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Bda14g01228 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 1 302 - -
Bda14g01228 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 302 - -
Bda14g01228 325 Coils Coil 86 106 - -
Bda14g01228 325 MobiDBLite consensus disorder prediction 278 311 - -
Bda14g01228 325 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Bda14g01228 325 MobiDBLite consensus disorder prediction 272 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01228 Bda-Chr14:12457879 Bda15g00546 Bda-Chr15:8519291 7.41E-46 dispersed
Bda11g01424 Bda-Chr11:18932366 Bda14g01228 Bda-Chr14:12457879 1.60E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17107 PF03195 LOB 9.40E-39 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01228 - - jre:109018950 343.584