Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01247 ATGTTACAGGAATATAATATTTGCTTCACTACAGTAAATATACCTTCAGATGGGGTTGTTCCTCGTCTTCCATCTACTAAAACTATGGGAGTTCTTCCGGAGCTGTTAAAAAATCTAGTTCAAAGAAGAAGAATGGTGAAGTCATGGATGAAGAATGCATCTGGTCTCAAGGTGCGGCAACTAGACATTCAACAGCAGGCACTAAAGCTCACTGCAAATAGTATGTATGGATGTCTGGGATTTTCTAATTCAAGGTTTTATGCAAAGCCACTTGCAGAGCTTATAACCCTACAAGGAAGGGAGATTCTGCAGAGTACTGTTGATCTTGTTCAGAATAATTTGAACTTGGAGGTAATATATGGTGATACAGATTCCATTATGATTTATAGTGGATTGGACGATATACCACAAGCAAAAGCAATTGCGGGAAAAGTCATACAAGAGGTTAACAAGAGATATAAGTGTTTGGAAATTGATCTTGATGGTTTATACAAGAGAATGTTGCTTCTAAAGAAAAAGAAGTATGCAGCTGTAAAGGTGCAGTTCAAGGATGGAATACCGTATGAGGTTATTGAACGGAAGGGCCTTGATATAGTTCGCCGGGACTGGAGCTTACTATCAAAGGAATTAGGAGATTTCTGTTTGAGTCAAATATTGTCTGGAGGGTCATGTGAAGATGTTGTTGAATCAATTCACAACTCTCTTTTGAAGACACAAGAAGAAATGAGGAATGGGCAAGTATCGCTAGATAAATATATCATCACAAAGACAATGACTAAGCCACCCGAAGCATACCCAGATGCCAGAAATCAACCCCACGTTCAAGTGGCACAAAGGTTGAAGCAAATGGGGTATTCTACTGGTTTTTCTGTAGGTGACACCATTCCTTACATAATCTGTCGTGAGCAGGGATCCTCTTCTGATGCTTCTACAGGAATTGCACAACGTGCTCGTCATCCCGAGGAGTTGAAAAGAGAAGACGGGAAATGGTTAATTGACATTGATTACTATCTGTCACAACAGATTCATCCAGTCGTCTCGCGACTTTGCGCTTCAATTCAGGGTACTAGTCCAGAACGCTTAGCTGACTGTTTAGGGCTCGACTCTTCCAAGTTCCACATTAAGTCAATTGAAGCTGTGAGTGATGCTTCCTCTTCAAACTTGTTTTCATTAGATGACGAGGAAATATATCGGGGTTGCAAACCTCTGACATTGTCATGTCCAAGCTGTTCGATTACATTTGATTGCCCAACTATCTTTAGCACAATTTGTACATCAGTCGGTGAAAAGACTATGTCTAATGTGGATGAATCGACCACAAGTTTTTGGAGCAAATTGCATTGTCCTAAATGCCCAGAAGATGGCAATGTGGGTAGAATCTCTCCTGGCATGCTTGCCAATCAGGTTAAAAGGCAAGCAGCGTGGTTCATTTCAATGTATTACAAAGGCGTAATGATGTGTGATGAAGAGACTTGCAAGTGCACCACTCGCTCTCTCAATCTCCGTCTTATTGGTGATGCTGAGAAAGGAACAGTATGCCCAAATTATCCACACTGCAAAGGTCGTCTTGTGAGAAAGTACTCGGCTAAGGATCTATACAAGCAAGTTTTATATTTCTGCCTTGTATTGGATACAGTACGATGTATAGAAAAGGTGGAAATCAGCACCAGAATGACATTAGAGAAAAAATTGGCCAAAATTCGACCAATGGTTGATTTAGCGGCATCTACCATTCATCGGATTCGAGATCAGAATGCATATGGTTGGGTACAGTTGCAGGATATTGCCGTCACAATTTGA 1800 40.78 MLQEYNICFTTVNIPSDGVVPRLPSTKTMGVLPELLKNLVQRRRMVKSWMKNASGLKVRQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIPQAKAIAGKVIQEVNKRYKCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGIPYEVIERKGLDIVRRDWSLLSKELGDFCLSQILSGGSCEDVVESIHNSLLKTQEEMRNGQVSLDKYIITKTMTKPPEAYPDARNQPHVQVAQRLKQMGYSTGFSVGDTIPYIICREQGSSSDASTGIAQRARHPEELKREDGKWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFHIKSIEAVSDASSSNLFSLDDEEIYRGCKPLTLSCPSCSITFDCPTIFSTICTSVGEKTMSNVDESTTSFWSKLHCPKCPEDGNVGRISPGMLANQVKRQAAWFISMYYKGVMMCDEETCKCTTRSLNLRLIGDAEKGTVCPNYPHCKGRLVRKYSAKDLYKQVLYFCLVLDTVRCIEKVEISTRMTLEKKLAKIRPMVDLAASTIHRIRDQNAYGWVQLQDIAVTI 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12938393 12943269 + Bda028126.1 Bda14g01247 21298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01247 599 Coils Coil 146 166 - -
Bda14g01247 599 Pfam DNA Polymerase alpha zinc finger 391 595 IPR015088 GO:0003887|GO:0006260
Bda14g01247 599 Gene3D Helix hairpin bin 28 79 - -
Bda14g01247 599 PRINTS DNA-directed DNA-polymerase family B signature 118 126 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bda14g01247 599 PRINTS DNA-directed DNA-polymerase family B signature 65 77 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bda14g01247 599 Gene3D Palm domain of DNA polymerase 1 183 IPR023211 -
Bda14g01247 599 Gene3D - 196 381 IPR042087 -
Bda14g01247 599 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 2 597 - -
Bda14g01247 599 SUPERFAMILY DNA/RNA polymerases 2 368 IPR043502 -
Bda14g01247 599 CDD POLBc_alpha 3 368 IPR045846 GO:0003887|GO:1902975
Bda14g01247 599 PANTHER DNA POLYMERASE 2 597 - -
Bda14g01247 599 Gene3D DNA Polymerase alpha, zinc finger 390 584 IPR038256 -
Bda14g01247 599 TIGRFAM pol2: DNA polymerase (pol2) 2 350 - -
Bda14g01247 599 ProSitePatterns DNA polymerase family B signature. 120 128 IPR017964 GO:0000166|GO:0003676
Bda14g01247 599 Pfam DNA polymerase family B 25 352 IPR006134 GO:0000166|GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01239 Bda-Chr14:12781813 Bda14g01247 Bda-Chr14:12938393 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01247 K02320 - jre:109009092 976.081