Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01250 | ATGTGGGATCTGAATGACTCGCCCGATCAGAAAAAAGACACTGAATCCGACGGCTGTTCTTCCCTCAAGACTTCAATCGACGGGGACGGGGACGGCGACAAGGGGAAACGGGTCGGATGCTTTTCGAATTCAAGTTCTTCTGCAGTTGTGATCGAAGACGGATCCGACGAAGACTGCGGCGATAAGGAAGCAACACCTCAGGACTTTATGGAAACGGATAACCCGGTGACCCGGCAGTTTTTCCCGGTGGAAGACTCCCAAGTCGGCGCTTCTCCGGAGGGAGGTGGCAGTGGCGGTGCTTCGTTCCCTCGGGCTCGCTGGGTTGGGGTGAAATTCTGTCAGACAGAACCTGTCGTAGATACTGGAACGTCATCTGAGAAGTCGCTGCCGATGAAAAAGAGCCGCCGAGGGCCGAGGTCCCGTAGTTCTCAGTATCGTGGCGTCACGTTCTACCGAAGAACCGGCCGATGGGAATCCCATATCTGGGATTGTGGAAAACAGGTTTATCTAGGTGGATTTGATACTGCACATGCAGCTGCTCGGGCTTACGATAGAGCAGCCATTAAATTCCGAGGAACAGAAGCTGACATAAATTTCGGCATCTATGACTATGAAGACGACTTGAAACAAATGAGGAACTTAACAAAGGAAGAATTTGTGCATGTTCTTCGTCGACAAAGCACTGGGTTTCCGAGGGGAAGCTCCAAGTACAGAGGCGTAACCCTACATAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAGTTTCTTGGCAAAAAGTACGTTTATTTGGGTTTGTTCGACACCGAGATTGAAGCTGCAAAGGCTTATGATAAAGCAGCCATTAAATGTAATGGTAAAGACGCTGTCACCAACTTTGATCCAAGCATATACGGGACAGAACTCGACGGAAAAGAATCGTCGAATAATGGAGTGGAGCACAATCTTGATCTGAGTTTAGGGAATTCAAACTCGAATGCAAGCAGCTTGCCCCCAGAGAATAATGGCAGAAGCTCTGCACATTTATCTGCATCTTTTCCATTTAAATCAGATTGGCAAAATCAAGGATTTAGACCGCAGGATCAGCTGAGTGGAAGGGGAAATGAGTATTTTCATGGTAGGGAGAGAAGCCTCGAGACTCAAACCATGCAGCTACTCGGCCAGACCCACCATCAACCTCTTGCTCACAGCACTCCAGGGCTAAATCCACAAAATTATCAAACTCGGTTTTTAACAAGTAGCAGCAATGGACGTAGAGTAGGAAGTGATCTTTCACTGTCTATTAATGACCAGCAATGGCAATCTAGTTCTTCTCAACAGTTTGCACTTGCTGCAGCATCATCAGGATTCCCACCCCAGATCAGATCGACTTTCCAGAATCATTTTCTGCATAAAAATGGATTGAACTTTCTCGTAAGACCCTCTTAA | 1425 | 47.79 | MWDLNDSPDQKKDTESDGCSSLKTSIDGDGDGDKGKRVGCFSNSSSSAVVIEDGSDEDCGDKEATPQDFMETDNPVTRQFFPVEDSQVGASPEGGGSGGASFPRARWVGVKFCQTEPVVDTGTSSEKSLPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGTEADINFGIYDYEDDLKQMRNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAAKAYDKAAIKCNGKDAVTNFDPSIYGTELDGKESSNNGVEHNLDLSLGNSNSNASSLPPENNGRSSAHLSASFPFKSDWQNQGFRPQDQLSGRGNEYFHGRERSLETQTMQLLGQTHHQPLAHSTPGLNPQNYQTRFLTSSSNGRRVGSDLSLSINDQQWQSSSSQQFALAAASSGFPPQIRSTFQNHFLHKNGLNFLVRPS | 474 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 13001301 | 13003774 | + | Bda028130.1 | Bda14g01250 | 21301 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01250 | 474 | MobiDBLite | consensus disorder prediction | 119 | 144 | - | - | |
Bda14g01250 | 474 | Gene3D | AP2/ERF domain | 235 | 294 | IPR036955 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | Gene3D | AP2/ERF domain | 143 | 201 | IPR036955 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Bda14g01250 | 474 | CDD | AP2 | 235 | 295 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | Pfam | AP2 domain | 144 | 192 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | Pfam | AP2 domain | 235 | 284 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | SUPERFAMILY | DNA-binding domain | 235 | 295 | IPR016177 | GO:0003677 | |
Bda14g01250 | 474 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Bda14g01250 | 474 | MobiDBLite | consensus disorder prediction | 301 | 341 | - | - | |
Bda14g01250 | 474 | CDD | AP2 | 144 | 199 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | PRINTS | Ethylene responsive element binding protein signature | 275 | 295 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | PRINTS | Ethylene responsive element binding protein signature | 237 | 248 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | SMART | rav1_2 | 236 | 299 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | SMART | rav1_2 | 144 | 206 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | ProSiteProfiles | AP2/ERF domain profile. | 236 | 293 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | SUPERFAMILY | DNA-binding domain | 143 | 200 | IPR016177 | GO:0003677 | |
Bda14g01250 | 474 | ProSiteProfiles | AP2/ERF domain profile. | 144 | 200 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01250 | 474 | PANTHER | AP2 DOMAIN TRANSCRIPTION FACTOR | 1 | 64 | - | - | |
Bda14g01250 | 474 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 64 | - | - | |
Bda14g01250 | 474 | PANTHER | AP2 DOMAIN TRANSCRIPTION FACTOR | 69 | 472 | - | - | |
Bda14g01250 | 474 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 69 | 472 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00787 | Bda-Chr2:48582555 | Bda14g01250 | Bda-Chr14:13001301 | 8.07E-102 | dispersed | |
Bda04g00251 | Bda-Chr4:19847284 | Bda14g01250 | Bda-Chr14:13001301 | 5.30E-145 | dispersed | |
Bda09g01480 | Bda-Chr9:46582710 | Bda14g01250 | Bda-Chr14:13001301 | 6.55E-85 | dispersed | |
Bda14g00335 | Bda-Chr14:2389991 | Bda14g01250 | Bda-Chr14:13001301 | 5.34E-12 | dispersed | |
Bda14g01250 | Bda-Chr14:13001301 | Bda10g00018 | Bda-Chr10:354206 | 5.93E-48 | dispersed | |
Bda14g01250 | Bda-Chr14:13001301 | Bda14g01253 | Bda-Chr14:13087803 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17110 | PF00847 | AP2 | 5.00E-10 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01250 | K09284 | - | qsu:111995790 | 548.51 |