Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01253 ATGTGGGATCTGAATGACTCGCCCGATCAGAAAAAAGACACTGAATCCGACGGCTGTTCTTCCCTCAAGACTTCAATCGACGGGGACGGGGACGGCGACAAGGGGAAACGGGTCGGATGCTTTTCGAATTCAAGTTCTTCTGCAGTTGTGATCGAAGACGGATCCGACGAAGACTGCGGCGATAAGGAAGCAACACCTCAGGACTTTATGGAAACGGATAACCCGGTGACCCGGCAGTTTTTCCCGGTGGAAGACTCCCAAGTCGGCGCTTCTCCGGAGGGAGGTGGCAGTGGCGGTGCTTCGTTCCCTCGGGCTCGCTGGGTTGGGGTGAAATTCTGTCAGACAGAACCTGTCGTAGATACTGGAACGTCATCTGAGAAGTCGCTGCCGATGAAAAAGAGCCGCCGAGGGCCGAGGTCCCGTAGTTCTCAGTATCGTGGCGTCACGTTCTACCGAAGAACCGGCCGATGGGAATCCCATATCTGGGATTGTGGAAAACAGGTTTATCTAGGTGGATTTGATACTGCACATGCAGCTGCTCGGGCTTACGATAGAGCAGCCATTAAATTCCGAGGAACAGAAGCTGACATAAATTTCGGCATCTATGACTATGAAGACGACTTGAAACAAATGAGGAACTTAACAAAGGAAGAATTTGTGCATGTTCTTCGTCGACAAAGCACTGGGTTTCCGAGGGGAAGCTCCAAGTACAGAGGCGTAACCCTACATAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAGTTTCTTGGCAAAAAGTACGTTTATTTGGGTTTGTTCGACACCGAGATTGAAGCTGCAAAGGCTTATGATAAAGCAGCCATTAAATGTAATGGTAAAGACGCTGTCACCAACTTTGATCCAAGCATATACGGGACAGAACTCGACGGAAAAGAATCGTCGAATAATGGAGTGGAGCACAATCTTGATCTGAGTTTAGGGAATTCAAACTCGAATGCAAGCAGCTTGCCCCCAGAGAATAATGGCAGAAGCTCTGCACATTTATCTGCATCTTTTCCATTTAAATCAGATTGGCAAAATCAAGGATTTAGACCGCAGGATCAGCTGAATGGAAGGGGAAATGAGTATTTTCATGGTAGGGAGAGAAGCCTCGAGACTCAAACCATGCAGCTACTCGGCCAGACCCACCATCAACCTCTTGCTCACAGCACTCCAGGGCTAAATCCACAAAATTATCAAACTCGGTTTTTAACAAGTAGCAGCGATGGACGTAGAGTAGGAAGTAGTGATCTTTCACTGTCTATTAATGACCAGCAATGGCAATCTAGTTCTTCTCAACAGTTTGCACTTGCTGCAGCATCATCAGGATTCCCACCCCAGATCAGATCGACTTTCCAGAATCATTTTCTGCATAAAAATGGATTGAACTTTCTCGTAAGACCCTCTTAA 1428 47.76 MWDLNDSPDQKKDTESDGCSSLKTSIDGDGDGDKGKRVGCFSNSSSSAVVIEDGSDEDCGDKEATPQDFMETDNPVTRQFFPVEDSQVGASPEGGGSGGASFPRARWVGVKFCQTEPVVDTGTSSEKSLPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGTEADINFGIYDYEDDLKQMRNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAAKAYDKAAIKCNGKDAVTNFDPSIYGTELDGKESSNNGVEHNLDLSLGNSNSNASSLPPENNGRSSAHLSASFPFKSDWQNQGFRPQDQLNGRGNEYFHGRERSLETQTMQLLGQTHHQPLAHSTPGLNPQNYQTRFLTSSSDGRRVGSSDLSLSINDQQWQSSSSQQFALAAASSGFPPQIRSTFQNHFLHKNGLNFLVRPS 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13087803 13090278 - Bda028140.1 Bda14g01253 21304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01253 475 MobiDBLite consensus disorder prediction 119 144 - -
Bda14g01253 475 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 64 - -
Bda14g01253 475 MobiDBLite consensus disorder prediction 1 75 - -
Bda14g01253 475 PRINTS Ethylene responsive element binding protein signature 237 248 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 PRINTS Ethylene responsive element binding protein signature 275 295 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 69 473 - -
Bda14g01253 475 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 64 - -
Bda14g01253 475 CDD AP2 235 295 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 SUPERFAMILY DNA-binding domain 235 295 IPR016177 GO:0003677
Bda14g01253 475 MobiDBLite consensus disorder prediction 301 341 - -
Bda14g01253 475 MobiDBLite consensus disorder prediction 1 18 - -
Bda14g01253 475 CDD AP2 144 199 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 SMART rav1_2 236 299 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 SMART rav1_2 144 206 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 ProSiteProfiles AP2/ERF domain profile. 236 293 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 Pfam AP2 domain 144 192 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 Pfam AP2 domain 235 284 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 SUPERFAMILY DNA-binding domain 143 200 IPR016177 GO:0003677
Bda14g01253 475 ProSiteProfiles AP2/ERF domain profile. 144 200 IPR001471 GO:0003700|GO:0006355
Bda14g01253 475 MobiDBLite consensus disorder prediction 349 368 - -
Bda14g01253 475 Gene3D AP2/ERF domain 235 294 IPR036955 GO:0003700|GO:0006355
Bda14g01253 475 Gene3D AP2/ERF domain 143 201 IPR036955 GO:0003700|GO:0006355
Bda14g01253 475 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 69 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01253 Bda-Chr14:13087803 Bda10g00018 Bda-Chr10:354206 6.38E-48 dispersed
Bda14g01250 Bda-Chr14:13001301 Bda14g01253 Bda-Chr14:13087803 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17111 PF00847 AP2 5.00E-10 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01253 K09284 - qsu:111995790 537.339