Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01265 TCTATGGAGATGTCACTGCTGAAACAACTTGGGAGCCATATCTCTTCATTTTTTGATTTGTTATCCAGGAACAACATAAACTCAGAACCTATTCTGAGGCATTACCAAGAAGCTGAACAGTTAATGAAGCAGTTGAACCCAGTTATAAAAGCACTTGTCGATCTTGAAATACAGTTTGATGAGGAAGTTCATAAACCATTTGAAGAATTAATTCATTTTGTGGATGAATTGATCGAGCATTATGAAAAGTGGCGACCATTTTCAAGCAAAGTAATCTTTGTTCTGCAAAGTGAAGACCTATTATCAAAGATCAAAAAACATGTCCTGGTTATTATCCAACTTCTGCAGACTTCAAACGAACAATTTAATGCGGCATTGACGTTAAGTGAGCAATGGGTTGAAGACATTGAACTCAAGAAATCTGAACGAATGTCAACTATCATCAACGATGCTCTTAGATATCAAGTAGAGGGCAGTCGGCCCAGCTCAGGCATGTTGGTGAAAATGGCAGAGTGCCTGAACTTATGTACAAACCAGGAGATTCTGATAGAGGCAGTAGCACTGCAGAAGTTGAAAGAGAATGCTGAACAAGCTGAGCAGAACGACGAAGCTGAGCATATTGATCAAATTATTTGTCTTCTGATGTCCATGCATGAGCTGCTAATTGCAATTAAGAAGTCTCAAATTCATAGTCCTGTCGAAATACCTGCCGATTTGTTCTGTCCCATCTCTCTGGAACTAATGACTGATCCAGTGATTGTGACATCTGGACAAACATATGAACGAAGTTTTATCAAGAACTGGATCGACCTCGGCCTCGATGTTTGTCCGAAGACAAGACAGCAATTGGTCAACACTAATTTGTGTCCTAATATTATCGTCAAGGCACTTATCACAAACTGGTGTGAAATAAACAATGTGAAGCTACCTGATTCCACTTGTACAGTGAGCTTAAACCAAACATTGGTTGAAATCAGTGAGCGTAAACCTGATAAGAAGTTAAAGTCATCCAATGAAATTGGGGAGGAAGCTTCTCCTTCTTATGCCAGTCCTACAGCCGAAGGTTCTCTGGTGGCCAACTCTAGTAATGACCTGGATATGGAAGACCAACTAGGAGCTGACTCGAGAAGAAGTGCTTTTCCCTTTATGGAGGAAGAACGAATTCAAAATATCAGCAGAGCTGCAACTGACCCGAATGAAATTTCTAATCCTAACTTTTCTCCCACAACATCAGACGATGCTGATGAAGCTTTTCCGGTCTCAACTACTTTGAGTAAGTATGAAGGCAATGAGTTTGAGAAGGTTAAACCAGAGTCGCCACTTAGATTGATGGATAGACCACATCGAGACCAAACTCCGAGCAGGTCGTTAGTGAATCTTGTCCCTCGAATAGTTCCGTCATCTGGGACTGGAACCAGCAATGACCTTTACGGGATTGAATCCCAAGTTAAGAATCTAGTTCAGGACTTGAGGAGCACTTCATACGATACTTTACGAGAGGCTACGGAGCAATTACGGCTGCTTGCGAAGGTCGACACGGAAAATCGGATTCTGATTGCAACTTGCGGAGCCATCGGCCTTTTAGTCAATCTGCTCCACTTTCCTGATGCTAAGATTCAGGAATATTCAGTCACTGCCCTTCTTAACTTATCGATCAACGATAATAATAAAAGTATCATTACTGAGGCTAATGCCATTGAACCACTGATTCATGTCCTCGAAACTGGCAGCTCGGAGGCAAAAGAGAACACGGCTGCTACCCTTTCCAGTATTTCAGTGATAGGAGATAATAAGATCAGGATTGGAAGTTCTGGTGCAATAGGACCATTGATTGAATTGTTGGAGAAAGGCAGTCCAAGGGGAAAGAAAGATGCAGCCACAGCCCTGTATAATTTGTCATTATCAAGCGAAAACAAGGCCAAGATCGTTCAAGCTGGAGGTGTGAAACATCTGGTGGACTTGATGGACCCGGCATATGGTATCGTGGACAAGGCCGTTTCGGTGTTGGCAAATTTGGCGACAATTCAGGATGGTAAGACGGAGATTGGTCAACACCCTGGTGGCATTCCTGCATTGGTCGAGGTAGTGGAGCTGGGTTCTCCTCGAGGAAAAGAAAGTGCAGCCGCGGCACTTTTGCTTCTTTGCTCTGCTAGTAGTAAATTTTGTTGGATGGTGCTACACGAAGGAGCAGTTCCTCCATTGGTGGTGCTGTCACAATCCGGCACCCCGAGGGCCAGAGAAAAGGTCAGTTTCTTCCTGTTGGCTCTCAAGTTTCGATTTATCAAAAGAAGACATTGA 2298 43.04 SMEMSLLKQLGSHISSFFDLLSRNNINSEPILRHYQEAEQLMKQLNPVIKALVDLEIQFDEEVHKPFEELIHFVDELIEHYEKWRPFSSKVIFVLQSEDLLSKIKKHVLVIIQLLQTSNEQFNAALTLSEQWVEDIELKKSERMSTIINDALRYQVEGSRPSSGMLVKMAECLNLCTNQEILIEAVALQKLKENAEQAEQNDEAEHIDQIICLLMSMHELLIAIKKSQIHSPVEIPADLFCPISLELMTDPVIVTSGQTYERSFIKNWIDLGLDVCPKTRQQLVNTNLCPNIIVKALITNWCEINNVKLPDSTCTVSLNQTLVEISERKPDKKLKSSNEIGEEASPSYASPTAEGSLVANSSNDLDMEDQLGADSRRSAFPFMEEERIQNISRAATDPNEISNPNFSPTTSDDADEAFPVSTTLSKYEGNEFEKVKPESPLRLMDRPHRDQTPSRSLVNLVPRIVPSSGTGTSNDLYGIESQVKNLVQDLRSTSYDTLREATEQLRLLAKVDTENRILIATCGAIGLLVNLLHFPDAKIQEYSVTALLNLSINDNNKSIITEANAIEPLIHVLETGSSEAKENTAATLSSISVIGDNKIRIGSSGAIGPLIELLEKGSPRGKKDAATALYNLSLSSENKAKIVQAGGVKHLVDLMDPAYGIVDKAVSVLANLATIQDGKTEIGQHPGGIPALVEVVELGSPRGKESAAAALLLLCSASSKFCWMVLHEGAVPPLVVLSQSGTPRAREKVSFFLLALKFRFIKRRH 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13332278 13335855 + Bda028154.1 Bda14g01265 21316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01265 765 SUPERFAMILY ARM repeat 483 756 IPR016024 -
Bda14g01265 765 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 646 687 IPR000225 GO:0005515
Bda14g01265 765 Gene3D - 475 758 IPR011989 -
Bda14g01265 765 Coils Coil 178 208 - -
Bda14g01265 765 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 605 647 IPR000225 GO:0005515
Bda14g01265 765 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 309 IPR013083 -
Bda14g01265 765 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 523 565 IPR000225 GO:0005515
Bda14g01265 765 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 13 753 - -
Bda14g01265 765 MobiDBLite consensus disorder prediction 329 359 - -
Bda14g01265 765 ProSiteProfiles U-box domain profile. 234 308 IPR003613 GO:0004842|GO:0016567
Bda14g01265 765 SMART arm_5 553 593 IPR000225 GO:0005515
Bda14g01265 765 SMART arm_5 635 674 IPR000225 GO:0005515
Bda14g01265 765 SMART arm_5 676 716 IPR000225 GO:0005515
Bda14g01265 765 SMART arm_5 594 634 IPR000225 GO:0005515
Bda14g01265 765 SMART arm_5 512 552 IPR000225 GO:0005515
Bda14g01265 765 CDD RING-Ubox_PUB 241 281 IPR045210 -
Bda14g01265 765 MobiDBLite consensus disorder prediction 340 359 - -
Bda14g01265 765 Pfam Armadillo/beta-catenin-like repeat 553 592 IPR000225 GO:0005515
Bda14g01265 765 Pfam Armadillo/beta-catenin-like repeat 596 633 IPR000225 GO:0005515
Bda14g01265 765 Pfam Armadillo/beta-catenin-like repeat 512 551 IPR000225 GO:0005515
Bda14g01265 765 Pfam Armadillo/beta-catenin-like repeat 635 673 IPR000225 GO:0005515
Bda14g01265 765 Pfam U-box domain 235 305 IPR003613 GO:0004842|GO:0016567
Bda14g01265 765 SUPERFAMILY RING/U-box 232 310 - -
Bda14g01265 765 PANTHER U BOX DOMAIN-CONTAINING 13 753 - -
Bda14g01265 765 SMART Ubox_2 238 301 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00003 Bda-Chr4:39685 Bda14g01265 Bda-Chr14:13332278 6.90E-158 dispersed
Bda04g00508 Bda-Chr4:53669868 Bda14g01265 Bda-Chr14:13332278 3.33E-143 dispersed
Bda12g00767 Bda-Chr12:36283255 Bda14g01265 Bda-Chr14:13332278 1.10E-11 dispersed
Bda14g01265 Bda-Chr14:13332278 Bda01g01561 Bda-Chr1:51500294 5.39E-22 dispersed
Bda14g01265 Bda-Chr14:13332278 Bda07g00590 Bda-Chr7:7230889 3.07E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01265 - - tcc:18611233 726.087