Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01286 ATGCTGATGTTTCAGCCTTCGAAGAGAGATGGGGTTGTTGGGTTTGACGGTGGCGGAGCTGGGCATGTTCTAGATCTGGACACGGCCGTAAAAGACGGAGTATTGGGCGGCATTGACGGTGGCGTTGTTGGAACCGGAGTTGGGGAGAAATTGGATCTGAAGAAGATGATCGTAGATCTAAACTTGTCTGAGGTGCCGTCGGTGTTCATCTGCCCCATTTCTCTCGAACCAATGCAGGACCCAGTGACCCTTTGCACAGGCCAAACGTACGAGAGGTCCAATATTCTCAAATGGTTCAATCTGGGGCACTACACCTGCCCTACGACAATGCAGGAGCTTTGGGACGATTCCATTACACCCAACACCACACTTTACCATCTAATCTACACTTGGTTTACCCAGAAGTATTTTCTCATGAAGAAGAGGTCAGAAGATGTTCAAGGAAGAACGTCAGAACTTCTCAAAACTCTCAAAAAAGTTAAGGGTCAGGCCAGAGTTCAAGCCCTGAAGGAGGTTCGACAAATCGTGGCTGTTCATGCCACAGTTAGGAAAACAGTGATCGAGGAAGGAGGGGTTTCAATAATTACATCCCTATTAGGTCCCTTTACGTCTCACGCTGTCGGCTCTGAAGCCATCGGGATTCTTGTGAATTTGGCACTCGATTCAGACTCAAAAGTAAATTTGATGCAGCCAGCAAAATTTTCACTGGTGGTGGATATTCTAAACGAGGGGTCAATTGGAACTAAGACCAATTGTACGATGTTGATCGAGATGCTGATGGAAGAGAAAGATTTCCAGTCAGAAATCGTTTTGAGCCACAGCCTTTTGGTCGGATTAATGAGACTGATCAAAGATAAGAGGCATCCAAACGGAGTATTTTCAGGCCTCCGGCTCCTAAAAATGATATGCTTTCATTCAGAAGTGAGAAATTTGGTAGTAAGCATTGGGGTGGTTCGACAATTGGTTGAGATGTTACCTTTTCTGGGTCCGGATAGCTTAGAGCTCGTCCTCGTCATATTGGAAACTTTGTCATCTCTACCAGAAGGAGGATTAGCTTTGAAAGAGTGCTCATATACGATACCGTACATGGTGAAGCTAATTATGAGAGTTTCGGAGAGCTGTACAAAATATGCACTGTCGATCATATCGGCTGTGTGTAAACTTGCCCCCGATGAATGTTCTTCGGTTGCCGTTGATGAGGGGCTTGCTGCGAAGCTCCTCCTAGTTATTCAAAGTGGGTGTGGGCCAGCTTTGAAGCAGCAATCTGCTGAGCTGTTGAAGTTGTGTAGTCTGAATTACACAGATACGACGTTCATTTCCAAGTGCAAGCTTTCAAGAACTATACAATGA 1350 45.7 MLMFQPSKRDGVVGFDGGGAGHVLDLDTAVKDGVLGGIDGGVVGTGVGEKLDLKKMIVDLNLSEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHYTCPTTMQELWDDSITPNTTLYHLIYTWFTQKYFLMKKRSEDVQGRTSELLKTLKKVKGQARVQALKEVRQIVAVHATVRKTVIEEGGVSIITSLLGPFTSHAVGSEAIGILVNLALDSDSKVNLMQPAKFSLVVDILNEGSIGTKTNCTMLIEMLMEEKDFQSEIVLSHSLLVGLMRLIKDKRHPNGVFSGLRLLKMICFHSEVRNLVVSIGVVRQLVEMLPFLGPDSLELVLVILETLSSLPEGGLALKECSYTIPYMVKLIMRVSESCTKYALSIISAVCKLAPDECSSVAVDEGLAAKLLLVIQSGCGPALKQQSAELLKLCSLNYTDTTFISKCKLSRTIQ 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13809331 13810680 + Bda028181.1 Bda14g01286 21337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01286 449 SUPERFAMILY ARM repeat 153 268 IPR016024 -
Bda14g01286 449 PANTHER WDSAM1 PROTEIN 38 448 IPR045185 GO:0061630
Bda14g01286 449 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 38 448 - -
Bda14g01286 449 CDD RING-Ubox_PUB 69 111 IPR045210 -
Bda14g01286 449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 138 IPR013083 -
Bda14g01286 449 ProSiteProfiles U-box domain profile. 64 138 IPR003613 GO:0004842|GO:0016567
Bda14g01286 449 Pfam U-box domain 65 135 IPR003613 GO:0004842|GO:0016567
Bda14g01286 449 SUPERFAMILY RING/U-box 61 135 - -
Bda14g01286 449 Gene3D - 139 445 IPR011989 -
Bda14g01286 449 SMART Ubox_2 68 131 IPR003613 GO:0004842|GO:0016567
Bda14g01286 449 SUPERFAMILY ARM repeat 236 435 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01286 Bda-Chr14:13809331 Bda02g00818 Bda-Chr2:48770320 2.80E-33 dispersed
Bda11g01486 Bda-Chr11:21877056 Bda14g01286 Bda-Chr14:13809331 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01286 - - jre:108985646 696.812