Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01299 ATGGGTTTTGATAACCATCTTTGCGACGTGGGTCTTCTTCTAGGTTTAGGATTCACTTCTACCCAGGATTCTGAATCAAACACTGTCAATCAGTTTTTGAAGAAACCTACCTTCGATCACGTCGGAGGAGGTCTCGAGCCGTCTTTAACTTTGGGTCTTCCAGGCGAGACTCATCGAATCGGAAGCCAAAAGATTAATATGAACAAAGGTTGTGAGGAGGGAGATGATCTGATTCGGCAAACTTCGTCGCAAAGTGCTGTTTCTTCTTTCTCCAGTGCTAGGGTGAAGAGAGAGAGAGAGCATAGCAGTGAGGAGGTCGAGGTGGAGAAAGTCTCGTCAAGAGTAAGCGATGAAGATGAAGATGGCTCTAATGCCAGAAAGAAACTTAGGCTAACGAAAGATCAGTCTGCCCTCCTGGAAGAAAGCTTCAAACTCAACAGCACTCTCAACCCTAAGCAAAAGCAAGCTTTAGCTAGGCAGCTAAATCTCCGACCCAGACAAGTTGAAGTGTGGTTCCAGAACAGACGAGCGAGAACAAAGCTCAAGCAAACAGAAGTAGACTACGAGTTTCTGAAGAAATGCTGCGAAACCCTGACAGATGAAAACAGAAGGCTACAGAAAGAGCTTCAGGAGCTGAAGGCAGTAAAAATGGCTCAACCCCTTTACATGCACATGCCGGCAGCAACCCTTGCGATCTGTCCTTCTTGTGAGAGGCTCAACGGTGAAGTTTCCAAGACTCCATTTTCCATGGCTTCGAAGCCTGCCTTCTACAATCTCTTCACTAATCCTTCTGCCGCCTGTTAG 804 46.64 MGFDNHLCDVGLLLGLGFTSTQDSESNTVNQFLKKPTFDHVGGGLEPSLTLGLPGETHRIGSQKINMNKGCEEGDDLIRQTSSQSAVSSFSSARVKREREHSSEEVEVEKVSSRVSDEDEDGSNARKKLRLTKDQSALLEESFKLNSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDYEFLKKCCETLTDENRRLQKELQELKAVKMAQPLYMHMPAATLAICPSCERLNGEVSKTPFSMASKPAFYNLFTNPSAAC 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14333252 14334271 + Bda028203.1 Bda14g01299 21350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01299 267 Gene3D - 119 187 - -
Bda14g01299 267 ProSiteProfiles 'Homeobox' domain profile. 122 182 IPR001356 GO:0003677
Bda14g01299 267 CDD homeodomain 126 183 IPR001356 GO:0003677
Bda14g01299 267 SMART HOX_1 124 186 IPR001356 GO:0003677
Bda14g01299 267 SUPERFAMILY Homeodomain-like 115 183 IPR009057 -
Bda14g01299 267 ProSitePatterns 'Homeobox' domain signature. 157 180 IPR017970 GO:0000981|GO:0006355
Bda14g01299 267 MobiDBLite consensus disorder prediction 93 128 - -
Bda14g01299 267 SMART halz 182 225 IPR003106 GO:0006355|GO:0043565
Bda14g01299 267 Coils Coil 188 218 - -
Bda14g01299 267 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22-LIKE 7 267 - -
Bda14g01299 267 Pfam Homeodomain 126 180 IPR001356 GO:0003677
Bda14g01299 267 MobiDBLite consensus disorder prediction 82 128 - -
Bda14g01299 267 Pfam Homeobox associated leucine zipper 182 215 IPR003106 GO:0006355|GO:0043565
Bda14g01299 267 PANTHER - 7 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00604 Bda-Chr1:33050342 Bda14g01299 Bda-Chr14:14333252 6.52E-56 dispersed
Bda05g01092 Bda-Chr5:59257255 Bda14g01299 Bda-Chr14:14333252 1.65E-59 dispersed
Bda09g00987 Bda-Chr9:39417747 Bda14g01299 Bda-Chr14:14333252 6.58E-37 dispersed
Bda14g01299 Bda-Chr14:14333252 Bda11g01227 Bda-Chr11:12694178 2.00E-23 dispersed
Bda14g01299 Bda-Chr14:14333252 Bda03g00154 Bda-Chr3:1282273 1.20E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17117 PF00046 Homeodomain 2.20E-16 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01299 K09338 - jre:109019457 325.479