Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01299 | ATGGGTTTTGATAACCATCTTTGCGACGTGGGTCTTCTTCTAGGTTTAGGATTCACTTCTACCCAGGATTCTGAATCAAACACTGTCAATCAGTTTTTGAAGAAACCTACCTTCGATCACGTCGGAGGAGGTCTCGAGCCGTCTTTAACTTTGGGTCTTCCAGGCGAGACTCATCGAATCGGAAGCCAAAAGATTAATATGAACAAAGGTTGTGAGGAGGGAGATGATCTGATTCGGCAAACTTCGTCGCAAAGTGCTGTTTCTTCTTTCTCCAGTGCTAGGGTGAAGAGAGAGAGAGAGCATAGCAGTGAGGAGGTCGAGGTGGAGAAAGTCTCGTCAAGAGTAAGCGATGAAGATGAAGATGGCTCTAATGCCAGAAAGAAACTTAGGCTAACGAAAGATCAGTCTGCCCTCCTGGAAGAAAGCTTCAAACTCAACAGCACTCTCAACCCTAAGCAAAAGCAAGCTTTAGCTAGGCAGCTAAATCTCCGACCCAGACAAGTTGAAGTGTGGTTCCAGAACAGACGAGCGAGAACAAAGCTCAAGCAAACAGAAGTAGACTACGAGTTTCTGAAGAAATGCTGCGAAACCCTGACAGATGAAAACAGAAGGCTACAGAAAGAGCTTCAGGAGCTGAAGGCAGTAAAAATGGCTCAACCCCTTTACATGCACATGCCGGCAGCAACCCTTGCGATCTGTCCTTCTTGTGAGAGGCTCAACGGTGAAGTTTCCAAGACTCCATTTTCCATGGCTTCGAAGCCTGCCTTCTACAATCTCTTCACTAATCCTTCTGCCGCCTGTTAG | 804 | 46.64 | MGFDNHLCDVGLLLGLGFTSTQDSESNTVNQFLKKPTFDHVGGGLEPSLTLGLPGETHRIGSQKINMNKGCEEGDDLIRQTSSQSAVSSFSSARVKREREHSSEEVEVEKVSSRVSDEDEDGSNARKKLRLTKDQSALLEESFKLNSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDYEFLKKCCETLTDENRRLQKELQELKAVKMAQPLYMHMPAATLAICPSCERLNGEVSKTPFSMASKPAFYNLFTNPSAAC | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 14333252 | 14334271 | + | Bda028203.1 | Bda14g01299 | 21350 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01299 | 267 | Gene3D | - | 119 | 187 | - | - | |
Bda14g01299 | 267 | ProSiteProfiles | 'Homeobox' domain profile. | 122 | 182 | IPR001356 | GO:0003677 | |
Bda14g01299 | 267 | CDD | homeodomain | 126 | 183 | IPR001356 | GO:0003677 | |
Bda14g01299 | 267 | SMART | HOX_1 | 124 | 186 | IPR001356 | GO:0003677 | |
Bda14g01299 | 267 | SUPERFAMILY | Homeodomain-like | 115 | 183 | IPR009057 | - | |
Bda14g01299 | 267 | ProSitePatterns | 'Homeobox' domain signature. | 157 | 180 | IPR017970 | GO:0000981|GO:0006355 | |
Bda14g01299 | 267 | MobiDBLite | consensus disorder prediction | 93 | 128 | - | - | |
Bda14g01299 | 267 | SMART | halz | 182 | 225 | IPR003106 | GO:0006355|GO:0043565 | |
Bda14g01299 | 267 | Coils | Coil | 188 | 218 | - | - | |
Bda14g01299 | 267 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22-LIKE | 7 | 267 | - | - | |
Bda14g01299 | 267 | Pfam | Homeodomain | 126 | 180 | IPR001356 | GO:0003677 | |
Bda14g01299 | 267 | MobiDBLite | consensus disorder prediction | 82 | 128 | - | - | |
Bda14g01299 | 267 | Pfam | Homeobox associated leucine zipper | 182 | 215 | IPR003106 | GO:0006355|GO:0043565 | |
Bda14g01299 | 267 | PANTHER | - | 7 | 267 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00604 | Bda-Chr1:33050342 | Bda14g01299 | Bda-Chr14:14333252 | 6.52E-56 | dispersed | |
Bda05g01092 | Bda-Chr5:59257255 | Bda14g01299 | Bda-Chr14:14333252 | 1.65E-59 | dispersed | |
Bda09g00987 | Bda-Chr9:39417747 | Bda14g01299 | Bda-Chr14:14333252 | 6.58E-37 | dispersed | |
Bda14g01299 | Bda-Chr14:14333252 | Bda11g01227 | Bda-Chr11:12694178 | 2.00E-23 | dispersed | |
Bda14g01299 | Bda-Chr14:14333252 | Bda03g00154 | Bda-Chr3:1282273 | 1.20E-64 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17117 | PF00046 | Homeodomain | 2.20E-16 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01299 | K09338 | - | jre:109019457 | 325.479 |