Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01355 ATGCCTAATCAAGTCGGCTCTTCGAGGAGAAGTTTGTCGTTGATGAATGTGTCATCACCGGGAAAAAAGAAAAGCTCCGAGAATGGAAGTCTTGACAGTTCTAATTCTCGGAAGTCTCTTTCATTTTCTCGTTCTATGGGTTCGACAAGTGAGCGTACAGTTAAACGTTTGCGTCTGTCAAAGGCCCTGACGATACCTGAAAGCACAAGTATCTATGAGGCATGTCGTAGAATGGTTGCTCGTAGAGTTGATGCTGTATTACTTACTGACTCCAATACATTGCTATGTGGAATACTAACGGACAAGGATATTGCAACTAGAGTCATTGCTCGTGAGATTAATCTCGAAGAAACACCTGTCTCTAAAGTTATGACAAGGAACCCGGTTTTTGTTCTTTCTGACACTCTTGCTGTGGATGCTCTCCAGAAGATGGTGCAAGGTAAGTGCAATAATGAGAGCCGGATCCAAAAGAGTTATTTAATGATGCTTTCCAAGTTGATAACAATGTCTATTACTGCAGGAAAGTTTAGGCATTTGCCTATTGTGGAGAATGGAGAGGTCATTGCTTTGCTTGATATAGCAAAATGTTTATACGATGCAATTGCTCGCTTGGAAAGGGCTGCTGAGAAGGGAAAAGCTATTGCTGCGGCTGTAGAAGGTGTCGAAAAAAATTGGGGAACATCTATTTCTGTAGGTCCAAACACCTTCATGGAGACACTTCGAGAAATGATATTTAGACCATCGTTGTCCACGCTCATCCCAGAGAATTCAAAGATTATAACTGTTTCACCCACAGAAACAGTTCTCTCAACAACAAAAAAAATGCTTGAATTTCGGCTAAGCGCTGCGGTTATAACAGTTGATAATAAACCACGTGGAATTTTGACTTCAAAGGATATCTTGATGCGGGTTATTGCACAAGATCTTCCAGCAGAGTTGACTCTGGTAGAAAAGGTAATGACTCCAAATCCAGAATGTGGAACCGTTGATACACCAATAGTTGATGCCCTACATACTATGCATGATGGAAAATTCTTGCACCTTCCTGTAATGAACAGAGATGGGAATATCGTTGCTGTCATTGATGTGATACATATTACTCATGCTGCTGTTGCCACAGTTGGAAGTACTCCTGGTAACAATAATGAGATTTCCAGCTCTATGATGCATAAGTTTTGGGATTCAGCCATGTCATTAACTACCAACGAGGATGATGAGACTCAGAGCGAAAGTTCATTGAAGTTAAATTCTATTGAGGATACGGATTCTGGAAGACGTCCTTCGTCTAATCTTCAAAATACTTTTTCTTTTAAAATCCAAGACAAAAAGGGGAGAACACATCGATTTATGTGTGATACTAGGAGTTTGACGGATGTTATAACAGCAATCCTTCAGAGAGTGGGAAATGACATTAATAGAAACAGCCTACCACAGATCATGTACGAGGATGAAGACAACGACAAAGTTGTACTGGCATCGGATGGTGATCTAACAGCGGCTGTAGAGCATGCAAAGTCTGCGGGTTTGAAGGGTTTGAGACTGCATTTAGATTATTCCAGAACAACTGAAGATAGAGGTGTTTCGAGTGTAGTAGATATGGATTATGCTCGTGTTGTTGCTTGGGCTTCCGCCTACAGTGCAGCTGCACTTGTTGCCGGCTTAGGCGTATTAGCATACTTGAAAAGATTCGGTTAG 1695 41.36 MPNQVGSSRRSLSLMNVSSPGKKKSSENGSLDSSNSRKSLSFSRSMGSTSERTVKRLRLSKALTIPESTSIYEACRRMVARRVDAVLLTDSNTLLCGILTDKDIATRVIAREINLEETPVSKVMTRNPVFVLSDTLAVDALQKMVQGKCNNESRIQKSYLMMLSKLITMSITAGKFRHLPIVENGEVIALLDIAKCLYDAIARLERAAEKGKAIAAAVEGVEKNWGTSISVGPNTFMETLREMIFRPSLSTLIPENSKIITVSPTETVLSTTKKMLEFRLSAAVITVDNKPRGILTSKDILMRVIAQDLPAELTLVEKVMTPNPECGTVDTPIVDALHTMHDGKFLHLPVMNRDGNIVAVIDVIHITHAAVATVGSTPGNNNEISSSMMHKFWDSAMSLTTNEDDETQSESSLKLNSIEDTDSGRRPSSNLQNTFSFKIQDKKGRTHRFMCDTRSLTDVITAILQRVGNDINRNSLPQIMYEDEDNDKVVLASDGDLTAAVEHAKSAGLKGLRLHLDYSRTTEDRGVSSVVDMDYARVVAWASAYSAAALVAGLGVLAYLKRFG 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 15839487 15843280 + Bda011053.1 Bda14g01355 21406

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01355 564 Pfam PB1 domain 434 517 IPR000270 GO:0005515
Bda14g01355 564 Gene3D - 29 151 IPR046342 -
Bda14g01355 564 ProSiteProfiles CBS domain profile. 58 117 IPR000644 -
Bda14g01355 564 MobiDBLite consensus disorder prediction 401 431 - -
Bda14g01355 564 Pfam CBS domain 256 302 IPR000644 -
Bda14g01355 564 Pfam CBS domain 60 106 IPR000644 -
Bda14g01355 564 Pfam CBS domain 316 369 IPR000644 -
Bda14g01355 564 CDD PB1_MUG70 435 519 - -
Bda14g01355 564 ProSiteProfiles CBS domain profile. 320 376 IPR000644 -
Bda14g01355 564 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 173 553 - -
Bda14g01355 564 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 21 148 - -
Bda14g01355 564 CDD CBS_pair_MUG70_2 256 372 - -
Bda14g01355 564 SUPERFAMILY CBS-domain pair 257 369 IPR046342 -
Bda14g01355 564 SUPERFAMILY CBS-domain pair 51 149 IPR046342 -
Bda14g01355 564 SMART cbs_1 61 109 IPR000644 -
Bda14g01355 564 SMART cbs_1 323 371 IPR000644 -
Bda14g01355 564 SMART cbs_1 258 305 IPR000644 -
Bda14g01355 564 Gene3D - 433 516 - -
Bda14g01355 564 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 21 148 IPR034896 -
Bda14g01355 564 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 173 553 IPR034896 -
Bda14g01355 564 SUPERFAMILY CAD & PB1 domains 423 523 - -
Bda14g01355 564 MobiDBLite consensus disorder prediction 1 53 - -
Bda14g01355 564 ProSiteProfiles CBS domain profile. 252 312 IPR000644 -
Bda14g01355 564 SMART PB1_new 434 519 IPR000270 GO:0005515
Bda14g01355 564 Gene3D - 248 373 IPR046342 -
Bda14g01355 564 ProSiteProfiles PB1 domain profile. 432 519 IPR000270 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01355 - - - rcu:8269215 723.005
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01593 Bda-Chr11:49479771 Bda14g01355 Bda-Chr14:15839487 0 wgd
Bda14g01355 Bda-Chr14:15839487 Bda15g00677 Bda-Chr15:10212934 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g93 . Blo16g00274 . . Bpe12g00476 . Bma06g00263 . . . Cma10g00055 Cma11g00028 . Car11g00028 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda14g01355 . Bpe15g00223 . . . Cmo10g00049 . . . . . . . . . . . . . . . . . . . . . . Csa01g00048 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001844 2 3 4 3 3 2 2 2 2 2 1 2 1 2 2 2 2 5 2 2 2 2 2 2 2 1 1 4 3 2 67