Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01357 | TTTGGCAAAAATCCAGAGACAGCAACCCCAAAAACCATCTCTACGCCCACCCAAATGGAGAGTAACCAACAAGCTCAATCTTCTTCATACCCGACAGCTCAGCCTCCTCCTCCCCCGTCTCAATTTCACCATCTTCTCCAGCAGCAACAGCAGCAGCTCCAGATGTTCTGGTCCTACCAGCGCCAGGAAATCGAACAGGTTAATGAGTTCAAGAACCACCAGCTCCCCCTTGCTCGAATCAAGAAGATTATGAAGGCCGATGAGGACGTCCGTATGATCTCCTCCGAAGCCCCGATTTTGTTTGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACGATTAGGTCGTGGCTTCACGCGGAGGAAAACAAGAGGAGAACTCTGCAGAAGAATGATATATCGGCGGCGATTACGAGGACTGATATCTTCGATTTTTTGGTTGATATTGTTCCGAGAGATGAGATCAAGGATGAGGGTGGGTTGGAAGGTGTGGTTGGGGCTACTGCGAGTGGCGTACCGTACTATTACCCTCCTTTAGGGCAGTCGGCAGGGGCTCCAGCTGGGATGATGATCGGGAGGCCGGCCATGGATCCCACCGGAATGTACATGCAGCCGCCTTCTCAGGCGTGGCAGTCAGTATGGCAGACTCCGCCTGAAGATGGGACATATGGGAGTGGAGGAAACAGCGGACTTGGCAATCTTAATGGACAAAGGTACTTGATTTGA | 726 | 52.2 | FGKNPETATPKTISTPTQMESNQQAQSSSYPTAQPPPPPSQFHHLLQQQQQQLQMFWSYQRQEIEQVNEFKNHQLPLARIKKIMKADEDVRMISSEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDISAAITRTDIFDFLVDIVPRDEIKDEGGLEGVVGATASGVPYYYPPLGQSAGAPAGMMIGRPAMDPTGMYMQPPSQAWQSVWQTPPEDGTYGSGGNSGLGNLNGQRYLI | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 15854238 | 15854963 | + | Bda011055.1 | Bda14g01357 | 21408 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01357 | 241 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Bda14g01357 | 241 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 21 | 237 | - | - | |
Bda14g01357 | 241 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Bda14g01357 | 241 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 74 | 137 | IPR003958 | - | |
Bda14g01357 | 241 | Gene3D | Histone, subunit A | 40 | 152 | IPR009072 | GO:0046982 | |
Bda14g01357 | 241 | SUPERFAMILY | Histone-fold | 23 | 146 | IPR009072 | GO:0046982 | |
Bda14g01357 | 241 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 | 21 | 237 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00526 | Bda-Chr8:5273937 | Bda14g01357 | Bda-Chr14:15854238 | 1.60E-30 | dispersed | |
Bda13g00494 | Bda-Chr13:5828638 | Bda14g01357 | Bda-Chr14:15854238 | 1.82E-08 | dispersed | |
Bda14g01357 | Bda-Chr14:15854238 | Bda15g00051 | Bda-Chr15:1980174 | 5.34E-64 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17122 | PF00808 | CBFD_NFYB_HMF | 6.80E-18 | CL0012 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01357 | - | - | csv:101213576 | 338.191 |