Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01404 ACAAAGCAAATTCTGGACCACAATATTGAATATTCAAAGCCAAAAGCTCGTATGGGGATGAGGAGCGGAGTAGGAGAAATTGTCGAAGTCCAAGGTGGCCATATCGTCCGCTCCACTGGCAGAAAAGACCGCCACAGCAAGGTCTACACAGCGAAAGGCCCTCGCGACCGACGGGTTCGCCTATCAGCCCACACCGCCATTCAGTTCTACGATGTTCAAGACCGCTTAGGCTACGATCGACCCAGCAAAGCTGTTGACTGGCTAATAAAAAAGGCTAAGTCCACCATTGACAAGCTCGCAGAGCTACCACCTTGCTTTCCCACCGCCGTTACTGAAGAAGGCGACACGAATAATGGCGGAAACGAGATGCTAATTGCGGCAGAGAAGTCCGAGTCATGTCGCTACAGTTTCCACCCCCAAAGGCATTTGGAGGAGAGTCAAGAAAATGACAATTCGTGTTTCGTTCCTCATCCGTTATCTTCCGTTCCCCTAACAGACACCATGAAAACCTTCTTCCCCACAAGCTCTACGACGTCCTCCATCAATTTCCAGACTTACCCACCCGATATACTTTCAAGAACCGCAAACCCCACTCAAGATCTTGGCCTCTCTCTCCATACTTTTCAAGATCCTGACCTGATTGACTCACAGGTAGAGCAAATCCACTCGCCACAAAACGATCAAAACCTTTTCTCCGGTTCGCATGAGGTAGGATATGAACCGAGTTATCCGAGAATGGTGGCCTGGGGAAACGATAGAGGCGCAGAACATGGAGGTGGGTTTGTTTTTAGCTCGATTCCAATTTTAAGCCAAGGTAGTTCGGCTGCATTTTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCTGTGTCAGTTCGAAGTTGGAATGATCTTTCAGTTGCTTCCGCCAAAGACCAGAAGACTCATTCAGTTCACCAACCTTCGTTGTTTGGTACTCGTTTCGTTTCTGATGGGTTGACTGGCTTTTGCATCCCAGGTCAGATTCCGGCCAACGATGACCATGGTATGGTTTCGGAGAGATTGTCGTCTTCTTCTATGAGCTCTCACCATTAA 1077 48.84 TKQILDHNIEYSKPKARMGMRSGVGEIVEVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSTIDKLAELPPCFPTAVTEEGDTNNGGNEMLIAAEKSESCRYSFHPQRHLEESQENDNSCFVPHPLSSVPLTDTMKTFFPTSSTTSSINFQTYPPDILSRTANPTQDLGLSLHTFQDPDLIDSQVEQIHSPQNDQNLFSGSHEVGYEPSYPRMVAWGNDRGAEHGGGFVFSSIPILSQGSSAAFSQRGPLQSSYSPSVSVRSWNDLSVASAKDQKTHSVHQPSLFGTRFVSDGLTGFCIPGQIPANDDHGMVSERLSSSSMSSHH 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 17469804 17470880 + Bda011121.1 Bda14g01404 21455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01404 358 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 118 IPR005333 GO:0003700
Bda14g01404 358 Pfam TCP family transcription factor 40 129 IPR017887 -
Bda14g01404 358 PANTHER TRANSCRIPTION FACTOR TCP4 14 118 - -
Bda14g01404 358 PANTHER TRANSCRIPTION FACTOR TCP4 130 358 - -
Bda14g01404 358 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 130 358 IPR005333 GO:0003700
Bda14g01404 358 ProSiteProfiles TCP domain profile. 41 99 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00823 Bda-Chr12:37667784 Bda14g01404 Bda-Chr14:17469804 3.99E-61 dispersed
Bda14g01404 Bda-Chr14:17469804 Bda15g00925 Bda-Chr15:16069852 0 dispersed
Bda14g01404 Bda-Chr14:17469804 Bda15g00870 Bda-Chr15:14028472 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17125 PF03634 TCP 6.60E-31 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01404 - - gmx:100796390 380.948