Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda14g01413 | TCTTCTTCTTCTTCTTCTTCGTCGATGCATTCTTTCAGAGTGGGAGCTACGGATCCTGGATCGGAAAAACAGAACCCAGTTAAAGAAATCAGATTCAGGGGCGTAAGGAAGCGGCCGTGGGGTCGATACGCCGCCGAAATCAGAGATCCTTGGAAAAAGACTCGGGTATGGCTCGGCACCTTCGACTCGGCCGAGGACGCTGCGCGGGCCTACGACACCGCCGCTCGAAAACTCCGGGGGCCGAAGGCGAAGACGAATTTCCCTTTGATCCTTTCCACCATCTCTTTACAGCAGCAAGTTTCATTTGCTTTATCGCCGGACTTGCTCGATGTAAATAGATTCCGCAATACGAGTAGTTTTCAGGTCAATAGACCTACGTCTAGCAGTTTGAGCTCCACCGTAGAGTCTTCCAGTGGCCCCAGGGTGTCCGTCCGGCCGTCTTCGGCTCCGAAGATCCACCGAATGCCCGTACAGTTCGTTCCGCCGGATGATTGCCGCAGCGACTGCGACTCGTCTTCCTCTGTTGTCGATGACGGCAATGATTGCGCTCACACGTCTTCATTCCCCAGAGTCTTGCCGTTCGATCTGAATCTCCTTCCTCCGATGACCGGTTTGGATTAA | 621 | 53.78 | SSSSSSSSMHSFRVGATDPGSEKQNPVKEIRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEDAARAYDTAARKLRGPKAKTNFPLILSTISLQQQVSFALSPDLLDVNRFRNTSSFQVNRPTSSSLSSTVESSSGPRVSVRPSSAPKIHRMPVQFVPPDDCRSDCDSSSSVVDDGNDCAHTSSFPRVLPFDLNLLPPMTGLD | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 17652183 | 17652803 | + | Bda011133.1 | Bda14g01413 | 21464 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda14g01413 | 206 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 26 | 189 | - | - | |
Bda14g01413 | 206 | SMART | rav1_2 | 31 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01413 | 206 | ProSiteProfiles | AP2/ERF domain profile. | 31 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01413 | 206 | SUPERFAMILY | DNA-binding domain | 32 | 89 | IPR016177 | GO:0003677 | |
Bda14g01413 | 206 | MobiDBLite | consensus disorder prediction | 121 | 144 | - | - | |
Bda14g01413 | 206 | MobiDBLite | consensus disorder prediction | 121 | 148 | - | - | |
Bda14g01413 | 206 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Bda14g01413 | 206 | CDD | AP2 | 31 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01413 | 206 | Pfam | AP2 domain | 31 | 80 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01413 | 206 | PRINTS | Ethylene responsive element binding protein signature | 32 | 43 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01413 | 206 | PRINTS | Ethylene responsive element binding protein signature | 54 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
Bda14g01413 | 206 | Gene3D | AP2/ERF domain | 30 | 90 | IPR036955 | GO:0003700|GO:0006355 | |
Bda14g01413 | 206 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 | 26 | 189 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00371 | Bda-Chr3:3123126 | Bda14g01413 | Bda-Chr14:17652183 | 6.17E-33 | dispersed | |
Bda09g00521 | Bda-Chr9:6849162 | Bda14g01413 | Bda-Chr14:17652183 | 7.95E-32 | dispersed | |
Bda09g00524 | Bda-Chr9:6930674 | Bda14g01413 | Bda-Chr14:17652183 | 7.45E-32 | dispersed | |
Bda13g00708 | Bda-Chr13:8336371 | Bda14g01413 | Bda-Chr14:17652183 | 8.84E-64 | dispersed | |
Bda15g00895 | Bda-Chr15:14645656 | Bda14g01413 | Bda-Chr14:17652183 | 8.18E-32 | dispersed | |
Bda14g01413 | Bda-Chr14:17652183 | Bda06g00278 | Bda-Chr6:4687774 | 7.72E-72 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17127 | PF00847 | AP2 | 1.40E-13 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda14g01413 | K09286 | - | csv:101221703 | 207.223 |