Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01413 TCTTCTTCTTCTTCTTCTTCGTCGATGCATTCTTTCAGAGTGGGAGCTACGGATCCTGGATCGGAAAAACAGAACCCAGTTAAAGAAATCAGATTCAGGGGCGTAAGGAAGCGGCCGTGGGGTCGATACGCCGCCGAAATCAGAGATCCTTGGAAAAAGACTCGGGTATGGCTCGGCACCTTCGACTCGGCCGAGGACGCTGCGCGGGCCTACGACACCGCCGCTCGAAAACTCCGGGGGCCGAAGGCGAAGACGAATTTCCCTTTGATCCTTTCCACCATCTCTTTACAGCAGCAAGTTTCATTTGCTTTATCGCCGGACTTGCTCGATGTAAATAGATTCCGCAATACGAGTAGTTTTCAGGTCAATAGACCTACGTCTAGCAGTTTGAGCTCCACCGTAGAGTCTTCCAGTGGCCCCAGGGTGTCCGTCCGGCCGTCTTCGGCTCCGAAGATCCACCGAATGCCCGTACAGTTCGTTCCGCCGGATGATTGCCGCAGCGACTGCGACTCGTCTTCCTCTGTTGTCGATGACGGCAATGATTGCGCTCACACGTCTTCATTCCCCAGAGTCTTGCCGTTCGATCTGAATCTCCTTCCTCCGATGACCGGTTTGGATTAA 621 53.78 SSSSSSSSMHSFRVGATDPGSEKQNPVKEIRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEDAARAYDTAARKLRGPKAKTNFPLILSTISLQQQVSFALSPDLLDVNRFRNTSSFQVNRPTSSSLSSTVESSSGPRVSVRPSSAPKIHRMPVQFVPPDDCRSDCDSSSSVVDDGNDCAHTSSFPRVLPFDLNLLPPMTGLD 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 17652183 17652803 + Bda011133.1 Bda14g01413 21464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01413 206 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 26 189 - -
Bda14g01413 206 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Bda14g01413 206 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Bda14g01413 206 SUPERFAMILY DNA-binding domain 32 89 IPR016177 GO:0003677
Bda14g01413 206 MobiDBLite consensus disorder prediction 121 144 - -
Bda14g01413 206 MobiDBLite consensus disorder prediction 121 148 - -
Bda14g01413 206 MobiDBLite consensus disorder prediction 1 27 - -
Bda14g01413 206 CDD AP2 31 88 IPR001471 GO:0003700|GO:0006355
Bda14g01413 206 Pfam AP2 domain 31 80 IPR001471 GO:0003700|GO:0006355
Bda14g01413 206 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Bda14g01413 206 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Bda14g01413 206 Gene3D AP2/ERF domain 30 90 IPR036955 GO:0003700|GO:0006355
Bda14g01413 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 26 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00371 Bda-Chr3:3123126 Bda14g01413 Bda-Chr14:17652183 6.17E-33 dispersed
Bda09g00521 Bda-Chr9:6849162 Bda14g01413 Bda-Chr14:17652183 7.95E-32 dispersed
Bda09g00524 Bda-Chr9:6930674 Bda14g01413 Bda-Chr14:17652183 7.45E-32 dispersed
Bda13g00708 Bda-Chr13:8336371 Bda14g01413 Bda-Chr14:17652183 8.84E-64 dispersed
Bda15g00895 Bda-Chr15:14645656 Bda14g01413 Bda-Chr14:17652183 8.18E-32 dispersed
Bda14g01413 Bda-Chr14:17652183 Bda06g00278 Bda-Chr6:4687774 7.72E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17127 PF00847 AP2 1.40E-13 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01413 K09286 - csv:101221703 207.223