Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01437 ATGGATGAACCTTTTCTGTCAAGATCAAGAGCAGAGGAAGAATCTAGTAGAACATCGACGAGAAGAGAATTTCCTCCTGGATACATCGATATCGGACAGTCGTATCGCCAATCAACTTCGCATCTAATCACCTCCGATGCGATAATCCCAATCATCGCCTCTCCGAAGTCTCCTTACATCAAAGTCCTACCCACTTTTAACAGGAAGGGAAAAATCGCCCACCGCTCCAATTCCGCCCCGGCTCTATTCTCTGACATTAAGGAAGCATTCCGAGGTTCTTCGGACCCTAGGCCAGGTTGGAAATTGCCCCCTTTAATTGTCCGGCAAGCTTTCGTCGGCATCATACTATATTTCGCAATCGGCATTGTAGTTTACCTAACTGGGAGCTTCAAAGGGAAAACCACCTTTAAGACGGTAGATGCCATGTACTTCACTGTCGTCACTCTTTGTACCATTGGCTATGGTGATATTGTTCCAGATTCTACGTTTACTAAAATTTTTACTTGTGTCTTCATACTAGTTGGTTTTGGATTCATTGATATTCTGCTCAACGGCTTGGTCGTTTACATATGCGATCGTCAAGAGGCGGTCTTGTTGAGCGCAGTCGACGAGAATCGATTCAACGCCATGGTCAGGACCTACATGGTAGATAAGGAGAAGGGAAGAATGAGAATAAGAACAAAGGTGTGTTTGGCAGTGGGTGTTGTGGTCATTTGCATTGCAGTAGGGGCCATTGCTGTGCATTTTCTGGAGACATTGAATTGGGTTGATAGCATTTATCTTTCTATTACTTCTGTATCAACAGTGGGCTATGGAGATTATTCTTTTACAACTTTAGAAGGAAGATGCTTTGCCATTATTTGGCTTCTGGTGAGCACTTTGGCTGTTGCCAGGGCCTTTCTTTATCTCGCTGAGTTCAGAATTGACAAAAGAAACAGAAAAACTGCGACCTGGGTCCTTCAGAAGAAGATTACTATTGGCGATTTAGTAGCTGCCGATATAGACCACAACGGATTCATCAGTAAATCTGAATTTGTTATTTACAAGCTCAAAGAGATGGGGAAAATAGCAGAGAAAGACATTCTACTGATTGGCAAACAATTTGACTTATTGGACGCAAGCAACTGTGGCAAAATAACACTAGCTGATCTCATGGAAGATAAATGA 1167 42.93 MDEPFLSRSRAEEESSRTSTRREFPPGYIDIGQSYRQSTSHLITSDAIIPIIASPKSPYIKVLPTFNRKGKIAHRSNSAPALFSDIKEAFRGSSDPRPGWKLPPLIVRQAFVGIILYFAIGIVVYLTGSFKGKTTFKTVDAMYFTVVTLCTIGYGDIVPDSTFTKIFTCVFILVGFGFIDILLNGLVVYICDRQEAVLLSAVDENRFNAMVRTYMVDKEKGRMRIRTKVCLAVGVVVICIAVGAIAVHFLETLNWVDSIYLSITSVSTVGYGDYSFTTLEGRCFAIIWLLVSTLAVARAFLYLAEFRIDKRNRKTATWVLQKKITIGDLVAADIDHNGFISKSEFVIYKLKEMGKIAEKDILLIGKQFDLLDASNCGKITLADLMEDK 388
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 18739862 18741769 + Bda011172.2 Bda14g01437 21488
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01437 388 MobiDBLite consensus disorder prediction 1 20 - -
Bda14g01437 388 Pfam Ion channel 114 187 IPR013099 -
Bda14g01437 388 Pfam Ion channel 235 305 IPR013099 -
Bda14g01437 388 Gene3D - 329 387 - -
Bda14g01437 388 SUPERFAMILY Voltage-gated potassium channels 104 190 - -
Bda14g01437 388 Gene3D - 106 197 - -
Bda14g01437 388 PANTHER OS01G0696100 PROTEIN 52 384 - -
Bda14g01437 388 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 52 384 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bda14g01437 388 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Bda14g01437 388 MobiDBLite consensus disorder prediction 1 27 - -
Bda14g01437 388 SUPERFAMILY Voltage-gated potassium channels 218 324 - -
Bda14g01437 388 Gene3D - 198 326 - -
Bda14g01437 388 SUPERFAMILY EF-hand 331 385 IPR011992 -
Bda14g01437 388 PRINTS Two pore domain K+ channel signature 267 276 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bda14g01437 388 PRINTS Two pore domain K+ channel signature 147 175 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00075 Bda-Chr2:2986172 Bda14g01437 Bda-Chr14:18739862 1.49E-122 transposed
Bda09g00436 Bda-Chr9:5782644 Bda14g01437 Bda-Chr14:18739862 5.12E-62 transposed
Bda14g01437 Bda-Chr14:18739862 Bda15g00854 Bda-Chr15:13401791 1.74E-171 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01437 K05389 - cit:102629027 523.857