Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01450 ATGGCTTCCTCTGCCAGATTTTTCTTCTGCTCCTCCCCTGCCGCTGTCGTCGCCGTTCTGCTGTTTTTCTCCGTCTTTTCTTCCGCTTTTGCTTCCTCTGATTTCTCCATTATTGACTACGACTCGAAGCACCACATGGGCGCTCCTGATCGCACCGATAAGGAGGTTACGGAAATTTATGAGTCGTGGGTAGTCAAGCATGGCAAAGCCTACAACGCTCTTGGCGAGAAGGAGAAGAGATTTCAGATCTTCAAGGACAATCTGAGGTTCGTTGACGAGCACAACCTGGAGAACCGAACGTACAAGGTCGGTCTGAACCGATTTGCTGATCTCACGAACGAGGAGTATCGGACCACGTTTCTAGGATCCAAAAGCAGGCGGAAGGCTCGGCTCTCCGAGACCAAGAGCGACAGGTATCTGCATCGGGCTGGCGATGAGTTGCCTGATTCCATTGATTGGAGACAGCACGGCGCTGTCGGGCCTGTTAAGGATCAAGGCCAATGTGGGAGTTGTTGGGCGTTCTCGACGATAGCTGCTGTGGAAGGAATAAATAAAATTGTTACAGGCGAGCATATCTCTTTGTCAGAGCAAGAACTAGTGGACTGTGACAGATCATACAACCAGGGATGCAATGGAGGTCTTATGGATTATGCATTCGAATTCATCATGAACAATGGTGGCATTGATTCCGACGAGGACTACCCTTACAGGGCTCGCGATGGTGGCTGTGATCCGATCCGGAAAAACGCTAAGTTTGTGACGATCGACGGGTACGAAGATGTTCCAGAGAATGACGAGAACTCATTGAAGAAGGCGGTGTCAAACCAGCCTGTCAGCGTGGCCATTGAAGCCGGCGGCAGAGCTTTCCAACTTTACCAATCGGGCGTCTTTACCGGGCTATGCGGCACGGATTTGGATCACGGGGTTGTCGCAGTCGGATATGGTACTGAAAACGGAGTCGATTACTGGACGGTTAGAAACTCGTGGGGACCCAATTGGGGTGAAAGCGGATATATCAGATTAGAGCGTTTCTTGGCCGACACGACGACCGGTAAATGTGGAATTGCGATAGAGCCTTCGTATCCCATCAAGAAGGGACTGAACCCACCTAAGCCAAGCCCATCGCCACCTTCGCCGGTGAAGCCCTCTACCGTGTGCGATGAATACAACTCATGCCCGGAGAAAACCACTTGCTGCTGTATCTATCAATATGGAACTTACTGCTTTGGCTGGGGATGTTGCCCTCTCCAGTCTGCCACTTGCTGCGACGACCATTACAGTTGCTGCCCTCAAGACTATCCAATTTGCGATCTCGAGGCCGAAACTTGCCTGATGAGCAAGAACAATCCCGTGGGAGTGAAGCCACTAAAGCGTCTCCCAGCAAAGCGAACAAGGACTCCGCTGAATTTTGAGAAAAGGGCGTAG 1425 51.3 MASSARFFFCSSPAAVVAVLLFFSVFSSAFASSDFSIIDYDSKHHMGAPDRTDKEVTEIYESWVVKHGKAYNALGEKEKRFQIFKDNLRFVDEHNLENRTYKVGLNRFADLTNEEYRTTFLGSKSRRKARLSETKSDRYLHRAGDELPDSIDWRQHGAVGPVKDQGQCGSCWAFSTIAAVEGINKIVTGEHISLSEQELVDCDRSYNQGCNGGLMDYAFEFIMNNGGIDSDEDYPYRARDGGCDPIRKNAKFVTIDGYEDVPENDENSLKKAVSNQPVSVAIEAGGRAFQLYQSGVFTGLCGTDLDHGVVAVGYGTENGVDYWTVRNSWGPNWGESGYIRLERFLADTTTGKCGIAIEPSYPIKKGLNPPKPSPSPPSPVKPSTVCDEYNSCPEKTTCCCIYQYGTYCFGWGCCPLQSATCCDDHYSCCPQDYPICDLEAETCLMSKNNPVGVKPLKRLPAKRTRTPLNFEKRA 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 19515801 19517707 + Bda011193.1 Bda14g01450 21501

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01450 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 165 176 IPR000169 -
Bda14g01450 474 Pfam Cathepsin propeptide inhibitor domain (I29) 60 116 IPR013201 -
Bda14g01450 474 Gene3D Cysteine proteinases 36 365 - -
Bda14g01450 474 PRINTS Papain cysteine protease (C1) family signature 322 328 IPR000668 GO:0006508|GO:0008234
Bda14g01450 474 PRINTS Papain cysteine protease (C1) family signature 307 317 IPR000668 GO:0006508|GO:0008234
Bda14g01450 474 PRINTS Papain cysteine protease (C1) family signature 165 180 IPR000668 GO:0006508|GO:0008234
Bda14g01450 474 PANTHER CYSTEINE PROTEASE 41 392 - -
Bda14g01450 474 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 41 392 - -
Bda14g01450 474 SUPERFAMILY Cysteine proteinases 53 363 IPR038765 -
Bda14g01450 474 SMART Inhibitor_I29_2 60 116 IPR013201 -
Bda14g01450 474 Pfam Granulin 397 444 IPR000118 -
Bda14g01450 474 Gene3D Granulin 383 446 IPR037277 -
Bda14g01450 474 SMART pept_c1 147 363 IPR000668 GO:0006508|GO:0008234
Bda14g01450 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 305 315 IPR025660 -
Bda14g01450 474 CDD Peptidase_C1A 148 362 IPR039417 -
Bda14g01450 474 Pfam Papain family cysteine protease 147 363 IPR000668 GO:0006508|GO:0008234
Bda14g01450 474 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 322 341 IPR025661 -
Bda14g01450 474 SMART GRAN_2 386 443 IPR000118 -
Bda14g01450 474 SUPERFAMILY Granulin repeat 384 416 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01450 K25900 RD21; cysteine proteinase RD21 [EC:3.4.22.-] - zju:107426962 721.079
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda14g01450 Bda15g00848 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00202 Bda-Chr3:1601024 Bda14g01450 Bda-Chr14:19515801 0 dispersed
Bda04g00186 Bda-Chr4:5862597 Bda14g01450 Bda-Chr14:19515801 2.36E-165 dispersed
Bda14g01257 Bda-Chr14:13165097 Bda14g01450 Bda-Chr14:19515801 3.34E-163 dispersed
Bda14g01450 Bda-Chr14:19515801 Bda14g01395 Bda-Chr14:16864936 1.13E-120 dispersed
Bda15g01075 Bda-Chr15:19986427 Bda14g01450 Bda-Chr14:19515801 2.92E-64 dispersed
Bda01g01515 Bda-Chr1:50998471 Bda14g01450 Bda-Chr14:19515801 4.06E-128 transposed
Bda09g01063 Bda-Chr9:40885186 Bda14g01450 Bda-Chr14:19515801 7.96E-72 transposed
Bda14g01450 Bda-Chr14:19515801 Bda15g00848 Bda-Chr15:13193259 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g605 . . . . . Bpe12g00293 . . Cmo19g00605 . . . . . . Cpe04g00295 Cpe15g00476 . . . . . . . Cla02g00624 Cam02g0658 Cec02g0661 Cco02g0685 Clacu02g0666 . Cre02g0979 . . Cone3ag0991 Cone10ag1012 Lsi03g00521 Csa07g00735 . Cme01g00073 . . Bda15g00848 Bda14g01450 . . Bma03g01355 Bma08g00518 . . . Cma11g01732 . Car11g01109 Car19g00445 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001585 7 2 1 3 5 2 3 1 2 1 1 1 2 2 2 1 0 5 4 2 2 2 2 2 2 1 2 5 3 3 71
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda14g01450 Bda_Chr14 FPKM 0.0 3.191167 0.0 0.590458 3.94728 3.365917 3.44355 0.0 0.0