Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01452 ATGGAATTACGTCCAGACGAGCAGCAGAACCAGGCCTCTTTCTTTTTGCTGGACTCTCTGTACTGTGAGGAAGAAAAATGGGAAGACGAGGAGGAAACAGTACAACGAAGTTTTCCGGTGGCCAGTGACGGCGTCATCTGTAATCTTCTGTTTGAAGAAGATCCAGCTTTTTGTGAAAATGAAGAGCTTTTATCTCTCTTCTCCAAAGAGGAAGAACAGCTATACCGAACCCATGTCTGTCTGGAAAGTCTGAAGGCAGATCGCCTACTCTCTACAGCTCGCTCTGAGGCTGTAGATTGGATTCTGATAATGAATGCCCATTTCGGATTTACAGCTCTCACTGCCATTTTAGCCATTAACTATGTGGAAAGGTTTCTCTCCAGCCTCCATTTTCAGCGAGACAAACCTTGGATGGTTCAGCTGGTGGCTGTCACTTGCCTGTCTTTGGCTGCAAAAGTAGAAGAGATCGAAGTTCCTCTTCTTCTAGACCTCCAAGTGGAAGGAACTAAGTTTGTGTTCGAGGCGAAGACGATTCAGAGAATGGAGCTTCTGGTGCTGTCGAGTCTTCAATGGCGGATGCATCCAGTTACCCCTCTTTCATTTCTTGACCACATCACCAGAAGGCTGGGTTTTAAGAACCATCATCACTGGTGTTTTATCAGACGCTGTGAGAGTCTCACTCTCTCTCTTTTCTCAGACTCCAGATTCATCGGTTTTCTTCCCTCTGTAATTGCCACTGCAACGATGATGAATGTCATCGAACAGCTCGAAACCAGCAACTCACCGCCATTACAGAACCAGCTACTGAATTTTCTTAACATAACCAGGGATAAGGTAGAAGAGTGTTTTAATCTTATAAAAGAGTTGAAGTTCTTCTCCGTCAGTCATCTCAAGCGTAAGGAGAGAGTTTCAAGCAGCCCAAGCGGTGTCATTGACGGTTTCTTGACCTCTGATAGTTCAAATGATTCGTGGGTATCGGTGTGTTCATCGTCTTCATCAATCTATTCATCGCTAGAACCTCCATTGAAGAAGATCAGAGCTCAAAACCAGCAAATGAGGGTGCCTTCTATACCCAACCGAGTCTTCGTGGACGTTGTTGCAAGCCCTCCTTAG 1113 45.46 MELRPDEQQNQASFFLLDSLYCEEEKWEDEEETVQRSFPVASDGVICNLLFEEDPAFCENEELLSLFSKEEEQLYRTHVCLESLKADRLLSTARSEAVDWILIMNAHFGFTALTAILAINYVERFLSSLHFQRDKPWMVQLVAVTCLSLAAKVEEIEVPLLLDLQVEGTKFVFEAKTIQRMELLVLSSLQWRMHPVTPLSFLDHITRRLGFKNHHHWCFIRRCESLTLSLFSDSRFIGFLPSVIATATMMNVIEQLETSNSPPLQNQLLNFLNITRDKVEECFNLIKELKFFSVSHLKRKERVSSSPSGVIDGFLTSDSSNDSWVSVCSSSSSIYSSLEPPLKKIRAQNQQMRVPSIPNRVFVDVVASPP 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 19597163 19598491 + Bda011197.1 Bda14g01452 21503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01452 370 CDD CYCLIN 94 186 IPR013763 -
Bda14g01452 370 PANTHER CYCLIN-D3-2 6 337 - -
Bda14g01452 370 SMART cyclin_7 99 187 IPR013763 -
Bda14g01452 370 Gene3D - 76 194 - -
Bda14g01452 370 SUPERFAMILY Cyclin-like 58 194 IPR036915 -
Bda14g01452 370 SUPERFAMILY Cyclin-like 197 291 IPR036915 -
Bda14g01452 370 Pfam Cyclin, C-terminal domain 196 290 IPR004367 -
Bda14g01452 370 Pfam Cyclin, N-terminal domain 66 193 IPR006671 -
Bda14g01452 370 PANTHER CYCLINS 6 337 IPR039361 -
Bda14g01452 370 SMART Cyclin_C_2 196 331 IPR004367 -
Bda14g01452 370 Gene3D - 66 284 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00772 Bda14g01452 CCT
Bda08g00772 Bda14g01452 ECH
Bda14g01452 Bda15g00846 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01452 Bda-Chr14:19597163 Bda13g01369 Bda-Chr13:36271879 1.84E-45 dispersed
Bda08g00772 Bda-Chr8:10024538 Bda14g01452 Bda-Chr14:19597163 1.34E-103 transposed
Bda11g01447 Bda-Chr11:19956301 Bda14g01452 Bda-Chr14:19597163 3.60E-80 transposed
Bda14g01452 Bda-Chr14:19597163 Bda15g00846 Bda-Chr15:12997850 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01452 K14505 - qsu:112038380 367.466