Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01537 ATGGGGGCTCCAAAGCAGAAATGGACATTAGCAGAAGAGGCAGCTCTTAAAGCAGGAGTTGTTAAGCACGGAGCAGGGAAGTGGCGCACAATACTTAGAGATCCGGAATATAGTGGCATCTTATATTTGCGTTCCAATGTTGATCTTAAGGACAAGTGGCGAAATATGAGTGTTATGTTTAATGGATGGGGATCTCGAGAGAGAGCTAGGTTAGCAAAAAAACAACATGCCCCTAAAATGGACGACAGTTCCCTGACTCTTGATAATGGAACTCAAAGCGATGAAGGCACAGAAGATGTTGAGCTTCCTGGTAATTCCAGTGATTTGGTACAGATTGTTGGAGCAACGAGATCTGTTGTAAGATTAGACAATCTTGTAAGAGAAGCGATAACTGCATTGTCGGAGCCTGGCGGTTCTAATAAGACAACTATTGCCTCTTACATTGAGGATCAATATTGGGCACCTCCAAATTTCAAGAGGCTGCTATCAGCCAAACTCAAATTCATGACATCTAGCGGGAAACTTATCAAGGTTAAACGGAAGTACAGGGTTGCACCAGTTCAAGCATTTTCTGACAGAAAAAGACACTCCTCTGCATCCTTGTTGGAGGGACGGCAGAGGGTTCCTCCAATGGTTGATAATGATAATATGAGTTTTCCTCCAAGAGCTCAGGTTGATTTGGAGGTAGCCAAGCTGAGGAAAATGACTTATCAAGAGGCTGCTGCTGTTGCTGCTCAAGCAGTTGCTGAGGCAGAAGCAGCCATTGCAGAAGCAGAAGAAGCAGCAAGGGAGGCTGAGGTAGCTGAAGCAGATGCTGAAGTAGCACAGGCTTTCGCAGAAGCAGCAACAAAGACTTTGAAAGGAAGAAATGTGCCTAAGTATGTAGATATGGCCCGAGCTTGA 903 44.96 MGAPKQKWTLAEEAALKAGVVKHGAGKWRTILRDPEYSGILYLRSNVDLKDKWRNMSVMFNGWGSRERARLAKKQHAPKMDDSSLTLDNGTQSDEGTEDVELPGNSSDLVQIVGATRSVVRLDNLVREAITALSEPGGSNKTTIASYIEDQYWAPPNFKRLLSAKLKFMTSSGKLIKVKRKYRVAPVQAFSDRKRHSSASLLEGRQRVPPMVDNDNMSFPPRAQVDLEVAKLRKMTYQEAAAVAAQAVAEAEAAIAEAEEAAREAEVAEADAEVAQAFAEAATKTLKGRNVPKYVDMARA 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 26096950 26114356 + Bda011363.1 Bda14g01537 21588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01537 300 SMART sant 4 59 IPR001005 -
Bda14g01537 300 Pfam Myb-like DNA-binding domain 5 55 IPR001005 -
Bda14g01537 300 MobiDBLite consensus disorder prediction 82 100 - -
Bda14g01537 300 MobiDBLite consensus disorder prediction 71 104 - -
Bda14g01537 300 Coils Coil 241 275 - -
Bda14g01537 300 PANTHER SINGLE MYB HISTONE 4 1 294 IPR044597 GO:0003691
Bda14g01537 300 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bda14g01537 300 SUPERFAMILY Winged helix DNA-binding domain 117 195 IPR036390 -
Bda14g01537 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Bda14g01537 300 Gene3D - 115 197 IPR036388 -
Bda14g01537 300 SMART h15plus2 116 181 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bda14g01537 300 Pfam linker histone H1 and H5 family 123 179 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bda14g01537 300 Gene3D - 8 85 - -
Bda14g01537 300 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 118 186 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bda14g01537 300 SUPERFAMILY Homeodomain-like 2 73 IPR009057 -
Bda14g01537 300 CDD SANT_TRF 6 56 - -
Bda14g01537 300 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 1 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00887 Bda-Chr2:49268284 Bda14g01537 Bda-Chr14:26096950 3.26E-06 dispersed
Bda06g01187 Bda-Chr6:41558356 Bda14g01537 Bda-Chr14:26096950 5.24E-104 dispersed
Bda14g01282 Bda-Chr14:13769064 Bda14g01537 Bda-Chr14:26096950 1.12E-70 dispersed
Bda14g01537 Bda-Chr14:26096950 Bda09g00204 Bda-Chr9:2907657 7.22E-06 dispersed
Bda14g01537 Bda-Chr14:26096950 Bda14g00987 Bda-Chr14:7994641 4.60E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17130 PF00538 Linker_histone 2.80E-08 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01537 K09422 - qsu:112034690 346.665