Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda14g01617 ATGGCTGCCCCTACTATGGCTCTTTCTTCACCATCTTTTGCTGGAAAGACGGTGCAGCTCTCACCTTCTGCTCCGACGATTTTCGGCAATGGAAGAGTCAGCATGAGGAAGACCACCTCCTCTGGCAGCCCATGGTATGGTCCCGACCGTGTAAAGTACTTGGGTCCATTCTCCGGTGAAGCTCCGTCCTACCTGACTGGAGAATTCCCAGGAGATTATGGCTGGGACACTGCTGGATTATCGGCTGACCCAGAGACCTTTGCAAAGAACCGGGAGCTGGAAGTTATCCACTGTCGTTGGGCTATGCTCGGAGCTCTCGGATGCGTATTCCCGGAGCTTCTGTCCAGAAACGGCGTGAAGTTCGGAGAGGCCGTTTGGTTTAAGGCTGGATCTCAGATCTTCAGCGACGGAGGACTTGATTACTTAGGCAACCCTAGCTTGGTCCACGCTCAAAGCATCTTAGCCATATGGGCTTGTCAGGTCATCTTGATGGGAGCCGTCGAAGGTTACCGTGTCGCTGGAGGACCACTTGGAGAAATCACCGACCCAATCTATCCTGGTGGATCGTTTGATCCATTGGGTCTAGCAGACGACCCAGAGGCATTTGCAGAGCTAAAAGTGAAGGAGATAAAGAATGGAAGACTAGCCATGTTCTCAATGTTTGGATTCTTCGTTCAGGCTATTGTCACCGGAAAGGGACCTTTGGAGAATTTGGCCGATCACCTTGCCGACCCAGTTAACAACAATGCCTGGGCCTATGCCACCAACTTTGTTCCCGGAAAGTGA 786 52.04 MAAPTMALSSPSFAGKTVQLSPSAPTIFGNGRVSMRKTTSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 40739266 40740051 - Bda011608.1 Bda14g01617 21668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda14g01617 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 261 IPR001344 GO:0009765|GO:0016020
Bda14g01617 261 Pfam Chlorophyll A-B binding protein 61 227 IPR022796 -
Bda14g01617 261 SUPERFAMILY Chlorophyll a-b binding protein 44 258 - -
Bda14g01617 261 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 261 - -
Bda14g01617 261 Gene3D Chlorophyll a/b binding protein domain 52 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00940 Bda-Chr7:10933820 Bda14g01617 Bda-Chr14:40739266 0 dispersed
Bda07g00941 Bda-Chr7:10963433 Bda14g01617 Bda-Chr14:40739266 0 dispersed
Bda07g01813 Bda-Chr7:35220537 Bda14g01617 Bda-Chr14:40739266 2.98E-164 dispersed
Bda13g00597 Bda-Chr13:6963183 Bda14g01617 Bda-Chr14:40739266 2.41E-154 dispersed
Bda05g00395 Bda-Chr5:48965605 Bda14g01617 Bda-Chr14:40739266 1.92E-163 transposed
Bda14g01617 Bda-Chr14:40739266 Bda05g00187 Bda-Chr5:21442977 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda14g01617 K08912 - rcu:8264152 513.842