Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda14g01633 | ATGATGGTTGGAGGTGGGATGAAAAAGACAATAATTACAAGTGATAGAAGTGTTGGAAGAGGCTTTACAACCTACAATTCTGCCACTGCTGGAATTGATGGTCTGGGCTTCATAGCACGGGGGATTACATTCATTAATGGAGCCGGTCCAAAAATGGGTCAGGCGGTTGCTCTTCGATCAGCCTCTGATCTCGCCGTTTTCTACCAATGCGCCTTTTATGGGTATCAAGACACCCTTATGGTCCTCTCACAAAGGCAATTCTATAGAGAGTGTTACATCTACGGCACAATTGACTTCATTTTTGGCAATGCAGCTGTAGTCTTTCAAAAATGCATCATCTATGTGAAAAAACCCTTAAAGGGCCAAGTTAATGTGATCACTGCTCAAGGTCGAAACGATGGGTGGTTGGCTTGGCAAAACAGTAATTTTGCTTTGAGCACTTTGTATTATGGTGAGTATAATAACTTTGGCCCTAGGGCTTCAACCAAGTATAGGGTGAGATGGAGGGGCTTTCACGTAATTACAAGCCCACAAATTGCCTCCCGTTTCACTGTAGGTAGCCTCATTTCCGGCCAGTCGTGGTTGTCGACTACCGGAGTTCCATTCTCAGCTGGACTCTGA | 621 | 44.93 | MMVGGGMKKTIITSDRSVGRGFTTYNSATAGIDGLGFIARGITFINGAGPKMGQAVALRSASDLAVFYQCAFYGYQDTLMVLSQRQFYRECYIYGTIDFIFGNAAVVFQKCIIYVKKPLKGQVNVITAQGRNDGWLAWQNSNFALSTLYYGEYNNFGPRASTKYRVRWRGFHVITSPQIASRFTVGSLISGQSWLSTTGVPFSAGL | 206 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 41840049 | 41841020 | - | Bda011641.1 | Bda14g01633 | 21684 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda14g01633 | 206 | Pfam | Pectinesterase | 1 | 133 | IPR000070 | GO:0030599|GO:0042545 | |
| Bda14g01633 | 206 | PANTHER | PECTINESTERASE | 133 | 205 | - | - | |
| Bda14g01633 | 206 | PANTHER | PECTINESTERASE | 1 | 133 | - | - | |
| Bda14g01633 | 206 | Gene3D | - | 1 | 132 | IPR012334 | - | |
| Bda14g01633 | 206 | Gene3D | - | 133 | 206 | IPR012334 | - | |
| Bda14g01633 | 206 | ProSitePatterns | Pectinesterase signature 2. | 93 | 102 | IPR033131 | - | |
| Bda14g01633 | 206 | PANTHER | PECTINESTERASE/PECTINESTERASE INHIBITOR 59-RELATED | 1 | 133 | - | - | |
| Bda14g01633 | 206 | PANTHER | PECTINESTERASE/PECTINESTERASE INHIBITOR 59-RELATED | 133 | 205 | - | - | |
| Bda14g01633 | 206 | SUPERFAMILY | Pectin lyase-like | 1 | 205 | IPR011050 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda14g01633 | Bda-Chr14:41840049 | Bda15g00760 | Bda-Chr15:11202090 | 2.65E-74 | dispersed | |
| Bda14g01633 | Bda-Chr14:41840049 | Bda05g00007 | Bda-Chr5:516989 | 7.37E-118 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda14g01633 | K01051 | - | qsu:112007203 | 293.508 |