Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00024 | ATGAAAGCAATGGAGAGCTTGGAGGATCTGATTGAGGAAGTTAAGGCTCGGACACTTTGGTGGGCTTTGTGTATTTTCGGCATGGCCTACTTTTTGACCCATACCAGTAAATCAATGTGGATGAACCTACCTATATCTATTTTATTTGTTTATGCTCTGCGTATTCTTTTCAATGAAGTTGAGTTTCGTTGGAAGGTGAGAGCAGTTCGTCCACAAACATACTTATCTCATTTGGAAAAGAAACAGCTATCTGTGAATGATTCCCGGCTTGTTTCTGCAACTTTACCCTCAAGATGGAAAAGAAAAATTGATTCGCCTATTGTGGAAGCAGCAATGAAAGATTTTATTGATAAAATATTAAAGGATTTTGTGGTAGACTTGTGGTATTCAGAGATAACCCTAGATACAGAATTCCCAGAACAAATACGGTCAATAATTATGGATGCTCTTGGTGAAGTCACCGGGAGAGTTAAAGAGATGAACCTCGTCGATTTGCTTATGAGGTATGATGCTCTTTGCCATTATTTAACAGTTAATGTGGACGATGCTGTGGATGACATTGTACGCCAGTTTAAAGGGGTTTCTGACGGATTGATACGCAAAGTTGTTGGTTCACCATCTCCTGCTTTTGATGCCTCTTCTTCAATTTGGGATCAAACATTACCCTTGAATCCAGATGACTTAAATCAACATATTTCTAGACACTATAGTGCAGACGGGGCTAATAGTTATTCTGATAATGAGGAAGATGGAAAAGATCAAAGCAATACTCGTGAAGATGTCAGTGGATGGCATTCAGATACTGAGTTGAACGCCAAAAGTTTTCCACCTAGGGTGGTCAAGCGGGTTGAAGAGAATCGAGGTGTACATTCAGATAAAGAACTCAATTCAGGGGTGAAATATGGGATTAGCCAGGAAGGGGTTTCAGTAACCTCATATGACTTGGAAGATGTTGGTGTACCGCCTGAGTGGACCCCACCTAATGTTAGTGTGCCTTTGCTGAATTTGGTCGATAAAATATTTCAGCTAAACAGAAGAGGCTGGATAAGAAGACAGGTCCTTTGGATATCAAAACAGATTCTTCAGTTAATAATGGAGGATGCCCTGGACGATTGGCTTTTGAGACAGATACATTGGCTTCGAAGAGATGATATCATAGCTGAAGGCATTCGATGGGTTCAAGATATTTTGTGGCCAGATGGGACTTTCTTTCTAAGATTGAGGGATGTTCAATGCGAAGGTGATGATACTCAACATGATAAAAGTTCGTTTCAAACTACAAGTCAACCTGGTGGGAGCAAGTTCTCTAAGCCGGGGTCCTTTGAGGAGCAGCTTGAGGCAGCTCGAAGAGCCAGCGCTGTCAAGAAATTGCTGTTTGGTGGAGCTCCTACGACCTTGGTGAGCTTGATAGGACACAAACAGTACAAACGTTGTGCAAAAGATATTTACTACTTTACCCAATCTACCGTCTGCGTGAGACAACTCAGAATACCAGACAATTTTGTGAGGAAGATCAGAGATGAGCTTTCTGCAGTTGCTACTCTTGCCGTTCCTGCTGGTCATGTGTGGCATGTAGGACTAAGAAAAGCAGATAACAAGTTTTGGTTCAGAGAAGGGTGGCAGGAATTTGTCGATCATTACTCGATACGTGTGGGTTACTTTCTGGTATTTAGATACGAAGGAAATTCTTCTTTTGTTGTTTATATATTCAATCTAAGTACGTCCGAAATAAATTATCAATCAGCTAATCTCAGTATCAGTCAACTGTCCAAGTATTACAGTCGAAATGCTGTATTTGAAGAAATAGAAGATGATGACTCAGTTGACATCGTGGGTTCTTCACTTCCAAACTTGAATTCGGAAAAAAATAAAGCATTTGTTGATGGTTCAGATCAACTGAGATCTATCAAAATTCATAGGCCTCTGGCACTGCAAAATTTGTTTAATGGATCGAAACTGAATTGCATAAATTGGTCTAACGATGGTAGCTTGGATCCAACTACAGCTGGCAGCAATTCAACGTCAGATTTTCGATCTACACAACGTAATACGGTTCCAGTTAGTATTGCAGAGCCAAAAAAGTTTATGGACAACGAAGAACGGCAGATTTTGGATGATGAAATGCAAAAACTTAATAAGAGTGGAAGAAAGAAGAGGAAAACAGATGGGAATGAGCTTGGACCATCTTCGCAAAATGAGGAGGAAGTAGAAATGCGCTATAAGTTTTACAAAAGTGCTTCTGCGAGAAAAAGGACGGTGACTACAGAAGAACGGGAAAGGGTTGTCAATGCATCCAAAGCTTTTGAGCCCGTTAATCCCTTCTGTCGAGTTGTTTTGAGACCTTCGTATCTATATCGAGGTTGTATAATGTACTTGCCGTCTTGCTTTGCTGAAAAGAACCTGAGTGGCATTTCAGGATTCATCAAACTTCAGATTTCTGACGGGAGGCAGTGGTCGGTTCGATGTCTTAATAAAGGAGGTAAAACGAAGTTGAGTCAAGGTTGGTACGAATTTTGCTTAGAAAATAATTTGGGTGAAGGAGATGTTTGTGTGTTTGAATTGATCAAGGCCAGAGAAATTGTGCTAAAAGTTACTTTGTTTCGAGTAGTTGAAGAAGCTCGATTCGCAAACCCGGCTCCATTGCAGAGCTTTGGTAAACTCGTTAGAAAATAA | 2673 | 40.55 | MKAMESLEDLIEEVKARTLWWALCIFGMAYFLTHTSKSMWMNLPISILFVYALRILFNEVEFRWKVRAVRPQTYLSHLEKKQLSVNDSRLVSATLPSRWKRKIDSPIVEAAMKDFIDKILKDFVVDLWYSEITLDTEFPEQIRSIIMDALGEVTGRVKEMNLVDLLMRYDALCHYLTVNVDDAVDDIVRQFKGVSDGLIRKVVGSPSPAFDASSSIWDQTLPLNPDDLNQHISRHYSADGANSYSDNEEDGKDQSNTREDVSGWHSDTELNAKSFPPRVVKRVEENRGVHSDKELNSGVKYGISQEGVSVTSYDLEDVGVPPEWTPPNVSVPLLNLVDKIFQLNRRGWIRRQVLWISKQILQLIMEDALDDWLLRQIHWLRRDDIIAEGIRWVQDILWPDGTFFLRLRDVQCEGDDTQHDKSSFQTTSQPGGSKFSKPGSFEEQLEAARRASAVKKLLFGGAPTTLVSLIGHKQYKRCAKDIYYFTQSTVCVRQLRIPDNFVRKIRDELSAVATLAVPAGHVWHVGLRKADNKFWFREGWQEFVDHYSIRVGYFLVFRYEGNSSFVVYIFNLSTSEINYQSANLSISQLSKYYSRNAVFEEIEDDDSVDIVGSSLPNLNSEKNKAFVDGSDQLRSIKIHRPLALQNLFNGSKLNCINWSNDGSLDPTTAGSNSTSDFRSTQRNTVPVSIAEPKKFMDNEERQILDDEMQKLNKSGRKKRKTDGNELGPSSQNEEEVEMRYKFYKSASARKRTVTTEERERVVNASKAFEPVNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGISGFIKLQISDGRQWSVRCLNKGGKTKLSQGWYEFCLENNLGEGDVCVFELIKAREIVLKVTLFRVVEEARFANPAPLQSFGKLVRK | 890 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1644275 | 1656573 | - | Bda011778.2 | Bda15g00024 | 21719 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00024 | 890 | MobiDBLite | consensus disorder prediction | 245 | 266 | - | - | |
Bda15g00024 | 890 | Gene3D | - | 482 | 574 | IPR015300 | - | |
Bda15g00024 | 890 | Pfam | PXA domain | 105 | 178 | IPR003114 | - | |
Bda15g00024 | 890 | Gene3D | - | 752 | 872 | IPR015300 | - | |
Bda15g00024 | 890 | MobiDBLite | consensus disorder prediction | 706 | 724 | - | - | |
Bda15g00024 | 890 | MobiDBLite | consensus disorder prediction | 237 | 277 | - | - | |
Bda15g00024 | 890 | MobiDBLite | consensus disorder prediction | 706 | 733 | - | - | |
Bda15g00024 | 890 | MobiDBLite | consensus disorder prediction | 416 | 436 | - | - | |
Bda15g00024 | 890 | ProSiteProfiles | B3 DNA-binding domain profile. | 480 | 573 | IPR003340 | GO:0003677 | |
Bda15g00024 | 890 | Pfam | Sorting nexin C terminal | 348 | 489 | IPR013937 | - | |
Bda15g00024 | 890 | Pfam | B3 DNA binding domain | 778 | 868 | IPR003340 | GO:0003677 | |
Bda15g00024 | 890 | Pfam | B3 DNA binding domain | 493 | 571 | IPR003340 | GO:0003677 | |
Bda15g00024 | 890 | MobiDBLite | consensus disorder prediction | 421 | 435 | - | - | |
Bda15g00024 | 890 | CDD | B3_DNA | 485 | 571 | IPR003340 | GO:0003677 | |
Bda15g00024 | 890 | ProSiteProfiles | B3 DNA-binding domain profile. | 775 | 870 | IPR003340 | GO:0003677 | |
Bda15g00024 | 890 | SUPERFAMILY | DNA-binding pseudobarrel domain | 485 | 572 | IPR015300 | - | |
Bda15g00024 | 890 | PANTHER | PX SERINE/THREONINE KINASE PXK | 173 | 496 | - | - | |
Bda15g00024 | 890 | SUPERFAMILY | DNA-binding pseudobarrel domain | 769 | 868 | IPR015300 | - | |
Bda15g00024 | 890 | PANTHER | PX SERINE/THREONINE KINASE PXK | 6 | 168 | - | - | |
Bda15g00024 | 890 | PANTHER | SORTING NEXIN CARBOXY-TERMINAL PROTEIN | 6 | 168 | - | - | |
Bda15g00024 | 890 | PANTHER | SORTING NEXIN CARBOXY-TERMINAL PROTEIN | 173 | 496 | - | - | |
Bda15g00024 | 890 | CDD | B3_DNA | 773 | 868 | IPR003340 | GO:0003677 | |
Bda15g00024 | 890 | SMART | B3_2 | 775 | 870 | IPR003340 | GO:0003677 | |
Bda15g00024 | 890 | SMART | B3_2 | 485 | 573 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00250 | Bda-Chr1:26857802 | Bda15g00024 | Bda-Chr15:1644275 | 2.73E-09 | transposed | |
Bda03g00232 | Bda-Chr3:1794823 | Bda15g00024 | Bda-Chr15:1644275 | 5.00E-07 | transposed | |
Bda04g00305 | Bda-Chr4:46403515 | Bda15g00024 | Bda-Chr15:1644275 | 4.69E-06 | transposed | |
Bda04g00866 | Bda-Chr4:58465220 | Bda15g00024 | Bda-Chr15:1644275 | 1.09E-43 | transposed | |
Bda10g00203 | Bda-Chr10:6990181 | Bda15g00024 | Bda-Chr15:1644275 | 3.65E-06 | transposed | |
Bda10g00218 | Bda-Chr10:9864311 | Bda15g00024 | Bda-Chr15:1644275 | 1.78E-06 | transposed | |
Bda14g00530 | Bda-Chr14:3823437 | Bda15g00024 | Bda-Chr15:1644275 | 2.46E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17132 | PF08628 | Nexin_C | 1.90E-31 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00024 | - | - | mnt:21409635 | 481.87 |