Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00043 ATGGAGAAATCGGGATCAATGGCGGTCTGGGTTCTGTTCACTACTTGCTTAGTTACCCATCTGGTTTATGTCGCTCAAGCTCAGAATCAGACGGCCACAACTGATCCTGCTGAAGCTAGAGCTCTGAACTCAATCTTTGAACAATGGGGTATTGAAGCCCAATCAGGGGTTTGGAACATAAGTGGGGAACTATGCAGTGGAAGAGCCTCTCCCAACGACTCAGCCACCATTGATGACCTAGCTTATAATCCATTTATCAAATGTGATTGCTCATATGACAACAACGCTACCTGCCGCATAGTCGCTTTGAAGGCTTATGACCGCAGTGTTGTTGGTGTACTGCCGGAAGAGCTATGGACATTGACATTCCTCACTAATTTAAACTTGGGCCAGAATTACATTCAAGGCCCCCTTTCTGCGTCAGTGGGGAATCTAACACGAATGCAGTACTTGAACTTTGGCATCAACACATTATCAGGAGAACTTCCGAAAGAACTTGGAAATCTTACTGATCTGAGAATGTTGGCTATTGGATCCAATAACTTCTCTGGCCCCCTGCCATCTGAGATCGGAAATCTCGTTAAAATGGAGCAACTCTATATGGATAGTTCTGGAGTAAGTGGAGAGATTCCTACAACATTTGCCAAGCTAACTAGTCTACAGCAAATATGGGCATCAGACAATGAACTCACAGGCAGGATACCTGACTTCATTGGCAATTACTCAAAGCTTTCTGTCCTGAGGCTTCAAGGAAACTCTTTTGAAGGTCCTATACCAACGTCCTTCTCAAATTTGACGTCTTTAACTGATTTGAGAATAAGTGGTTTATCAAATGGGACCTCTTCACTGGGATTCATAAATAACATGAAGTCTTTATCTATCTTAATTCTGAGCAATAACAATATTTCTGGTTCGATTCCATCCAATATTGGAGAATTCGTGTCACTGACGCAGCTGGACTTGAGCTTCAACAATCTTGTGGGACCTATTCCAGATTCGATTTTCAATTTGACCTCTCTCTCCTTTTTGTTTCTTGGAAATAATACGTTAAATGGTACCCTGCCCGAACGAAAGAGTTCAACTCTTCTAAATATAGATGTATCATATAATCATTTGTCAGGGGGCTTTCCATCTTGGGTCAATAATCAAACCTTACAACTTAATTTAGTGGCCAACAACTTCACAGTAGGGAGTTCAAACAGCAGTGTTTTGCCTTCGGGATTAAACTGTCTTCAGCGGAACTTTCCTTGCAATCGTGGTTTGGGAAACTATTATAATTTTGCAATAAAGTGTGGAGGTCCAGCCATTACTAGCTCAGGAGGGATTGAATATGAAAAGGAGAATGAAACCCTTGGCCCTGCTACATACTTTGTTACTGGGACAAACAGGTGGGCTGTGAGTAATGTTGGGTATTTTTCTGGGAGCAGCAATCCTTCATACACGAGTTTTTCGGCATCACAATTCAGAAATACTTTAGACCCTGAACTTTTCCAAACATCACGGCTCTCTGCTTCATCGCTGAGGTACTATGGATTAGGCCTTGAAAATGGTAACTACACTGTCACTCTCCAGTTTACAGAAATAGCTTTCCCAGATTCAACTACATGGAGAAGCCTCGGGAGGCGCGTCTTTGATATTTATATACAGGGAAATCGGGTGTTGAAGGATTTTGACATTAGAAAGGCAGCAGGTGGGGTCTCATTTGTTGCTGTTCAGAGGCAATTCACGGTCCAAGTGTCCGAAAACTTCATGGAAATTCATCTCTTTTGGGCTGGAAAAGGAACTTGCTGCATACCAGCTCAAGGCACCTATGGTCCTTCTATTTCAGCCATCAGCGCCACTCCAAATTTCAACCCAACTGTTTCTAACAACCCTCCAACCACCAAGAAAAGTAAAACAGGGTTGATTGCTGGGGTTGTTGTCGGCGTCGGAGTTGTTCTTCTCCTGGCTGCTTTTGTATTTTTCTTTATTGTTTACAGAAGGAAAAAGCTTCGTGAAAAAGAAGAAGAGGAACTCCGAGGAATAGATGCGAGACCATATACTTTCAGTTATGCAGAACTGAAGGGTGCCACGGAGGACTTCAATTTGGCCAATAAGCTCGGAGAGGGAGGATTTGGGCCCGTTTATAAGGGAAAACTAAATGATGGGAGAGTGGTTGCTGTAAAGCAACTTTCTGCTGCATCCCACCAGGGAAAGAGGCAATTTGTGACTGAGATTGCTACAATATCTGCTGTCCAACATCGCAACCTTGTGAAACTCTACGGATGCTGCATCGAGGGAGACAAGCGTCTCCTCGTTTACGAATATCTCGAGAACAAGAGTCTCGATCAAGCACTGTTTGGAAAAAGAAACTTGAACCTCGATTGGGCGACCCGATTTGATATTTGTGTGGGCGTAGCAAGAGGTCTTGCTTATCTTCACGAGGAATCTAGGCTGCGCATTGTACACAGAGATGTAAAGGCCAGTAATATTCTGCTTGATGGGGAACTCATCCCCAAACTTTCCGACTTTGGTCTGGCCAAGCTTTATGATGACAAAAAGACCCACATAAGCACACGTGTGGCTGGCACAATTGGATATCTTGCACCAGAGTATGCCATGCGTGGCCACCTCACCGAAAAGGCTGATGTTTTTGCCTTTGGTGTTGTGGCTCTGGAGCTTGTTAGTGGAAGGCCAAATTCCGACACAAGCTTGGAACCGGACAAAGTTTATCTCCTCGAATGGGCATGGCATCTGCACGAAAACAACTGTGAAATTGAGATGGTGGATCCAAACCTATCGGAGTTTGATGAAGAAGAAGTAATACGAGTGATAGGAATAGCACTTCTTTGCACCCAAACGTCACCAAATCTCCGGCCGTCAATGTCTCGGGCGTTGGGAATGCTAAGTGGAGATATCGAAGTGACCCCGGTGACTTCAAGGCCCGGATATTTGACCGACTGGAAATTCGATGATATAAGCAACATCTCAATGGAAACAGCTGATAGAAGCCATTTCACCGGGACAACGGGGTCGAGCATGGTTGCCGATCCAGAGAATTCTCCCATTGACTGCTCCAAGCCGATGCTTCATGGCCTGATCGGAGACGGAAGATGA 3096 44.44 MEKSGSMAVWVLFTTCLVTHLVYVAQAQNQTATTDPAEARALNSIFEQWGIEAQSGVWNISGELCSGRASPNDSATIDDLAYNPFIKCDCSYDNNATCRIVALKAYDRSVVGVLPEELWTLTFLTNLNLGQNYIQGPLSASVGNLTRMQYLNFGINTLSGELPKELGNLTDLRMLAIGSNNFSGPLPSEIGNLVKMEQLYMDSSGVSGEIPTTFAKLTSLQQIWASDNELTGRIPDFIGNYSKLSVLRLQGNSFEGPIPTSFSNLTSLTDLRISGLSNGTSSLGFINNMKSLSILILSNNNISGSIPSNIGEFVSLTQLDLSFNNLVGPIPDSIFNLTSLSFLFLGNNTLNGTLPERKSSTLLNIDVSYNHLSGGFPSWVNNQTLQLNLVANNFTVGSSNSSVLPSGLNCLQRNFPCNRGLGNYYNFAIKCGGPAITSSGGIEYEKENETLGPATYFVTGTNRWAVSNVGYFSGSSNPSYTSFSASQFRNTLDPELFQTSRLSASSLRYYGLGLENGNYTVTLQFTEIAFPDSTTWRSLGRRVFDIYIQGNRVLKDFDIRKAAGGVSFVAVQRQFTVQVSENFMEIHLFWAGKGTCCIPAQGTYGPSISAISATPNFNPTVSNNPPTTKKSKTGLIAGVVVGVGVVLLLAAFVFFFIVYRRKKLREKEEEELRGIDARPYTFSYAELKGATEDFNLANKLGEGGFGPVYKGKLNDGRVVAVKQLSAASHQGKRQFVTEIATISAVQHRNLVKLYGCCIEGDKRLLVYEYLENKSLDQALFGKRNLNLDWATRFDICVGVARGLAYLHEESRLRIVHRDVKASNILLDGELIPKLSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFAFGVVALELVSGRPNSDTSLEPDKVYLLEWAWHLHENNCEIEMVDPNLSEFDEEEVIRVIGIALLCTQTSPNLRPSMSRALGMLSGDIEVTPVTSRPGYLTDWKFDDISNISMETADRSHFTGTTGSSMVADPENSPIDCSKPMLHGLIGDGR 1031
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1916344 1924989 - Bda011804.1 Bda15g00043 21738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00043 1031 Pfam Malectin domain 426 611 IPR021720 -
Bda15g00043 1031 CDD STKc_IRAK 700 962 - -
Bda15g00043 1031 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 109 1012 - -
Bda15g00043 1031 SUPERFAMILY L domain-like 75 405 - -
Bda15g00043 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Bda15g00043 1031 Gene3D Transferase(Phosphotransferase) domain 1 770 970 - -
Bda15g00043 1031 SMART serkin_6 694 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00043 1031 ProSiteProfiles Protein kinase domain profile. 694 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00043 1031 SUPERFAMILY Protein kinase-like (PK-like) 677 979 IPR011009 -
Bda15g00043 1031 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 109 1012 - -
Bda15g00043 1031 Gene3D Phosphorylase Kinase; domain 1 657 769 - -
Bda15g00043 1031 Gene3D Ribonuclease Inhibitor 58 279 IPR032675 -
Bda15g00043 1031 Gene3D - 423 615 - -
Bda15g00043 1031 Pfam Protein tyrosine and serine/threonine kinase 695 956 IPR001245 GO:0004672|GO:0006468
Bda15g00043 1031 Gene3D Ribonuclease Inhibitor 280 402 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02213 Bda-Chr1:57988957 Bda15g00043 Bda-Chr15:1916344 6.34E-83 dispersed
Bda02g00255 Bda-Chr2:40167149 Bda15g00043 Bda-Chr15:1916344 2.82E-99 dispersed
Bda07g00957 Bda-Chr7:11082695 Bda15g00043 Bda-Chr15:1916344 0 dispersed
Bda12g00820 Bda-Chr12:37630529 Bda15g00043 Bda-Chr15:1916344 5.05E-108 dispersed
Bda15g00043 Bda-Chr15:1916344 Bda03g01357 Bda-Chr3:49237166 3.50E-102 dispersed
Bda15g00864 Bda-Chr15:13783625 Bda15g00043 Bda-Chr15:1916344 2.01E-10 dispersed
Bda15g00043 Bda-Chr15:1916344 Bda12g00813 Bda-Chr12:37532606 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70091 PF07714 PK_Tyr_Ser-Thr 8.70E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00043 - - jre:108998011 1444.48