Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00051 ATGGATCAATCAGAGCAGGCCCATCTTCAACAACACCAACAACAATCTCAGCAGCCTGTCATGGGAGTAATTGCAGGTGCAGGTCATTATGCAGCTAATCCTTACCCAAATGCTGCCATGGTGGCTTCTGGAACTCCTCCAAATCAACCTCCAGCCTCTTTTTCAAATTCACCTCACCAGCTTGCATACCAGCAAGCCCAACATTTCTATCACCAACAGCAACAGCAACAACAACAACAGCTGCAAATGTTCTGGGCTAACCAAATGCAAGAAATTGAGCAGAATACAGACTTCAAAAATCACAGCCTTCCTCTTGCTAGGATAAAGAAAGTAATGAAAGCCGATGAGGACGTCAGGATGATATCGGCAGAAGCCCCAGTGATATTTGCAAAAGCGTGCGAAATGTTCATCCTCGAGCTGACCTTGCGCTCTTGGATCCATACAGAAGAGAACAAGAGAAGAACTCTGCAGAAAAATGATATTGCAGCTGCCATTTCGAGGACAGACGTCTTCGATTTCTTGGTCGACATCATTCCCAGGGATGAGTTGAAAGAGGAGGGATTGGGAGTGACAAAGGCCGCTCTTCCTGTCGTTGGCTCGCCGGCTGATATTCCTTATTACTATGTCCCGCCACATCCAGTTGGGCCCTCAATGTATGCAGCTCAACAGCCACGGCCACCTATTGCTTTTATGCCGTGGCCCCACAGCCAGCCGCAGCCGGACCAGAACAATGCATAG 738 48.37 MDQSEQAHLQQHQQQSQQPVMGVIAGAGHYAANPYPNAAMVASGTPPNQPPASFSNSPHQLAYQQAQHFYHQQQQQQQQQLQMFWANQMQEIEQNTDFKNHSLPLARIKKVMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKAALPVVGSPADIPYYYVPPHPVGPSMYAAQQPRPPIAFMPWPHSQPQPDQNNA 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1980174 1980911 + Bda011813.1 Bda15g00051 21746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00051 245 Gene3D Histone, subunit A 63 180 IPR009072 GO:0046982
Bda15g00051 245 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 12 213 - -
Bda15g00051 245 SUPERFAMILY Histone-fold 61 174 IPR009072 GO:0046982
Bda15g00051 245 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 12 213 - -
Bda15g00051 245 Pfam Core histone H2A/H2B/H3/H4 50 165 IPR007125 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01249 Bda-Chr7:15332462 Bda15g00051 Bda-Chr15:1980174 1.01E-67 dispersed
Bda14g01357 Bda-Chr14:15854238 Bda15g00051 Bda-Chr15:1980174 5.34E-64 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17135 PF00125 Histone 1.20E-18 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00051 K08066 - tcc:18594891 336.65