Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00075 ATGTCCAATTCTGAAGGGGGTAACAACGGCGTCGTCAACGGCGCTGTAATCGACTCTCAGAGACAACAGCCACCGAGTAATGGAGCGATTGTCGTCAAAAAGCCACCCTCCAAAGACCGCCACAGTAAAGTCGACGGGCGCGGTCGTCGTATCCGGATGCCGATCATTTGCGCCGCGCGGGTATTTCAGCTGACCAGGGAGCTTGGCCACAAGTCTGATGGTCAGACCATTGAGTGGCTTCTCCGGCAAGCCGAGCCTTCAATTATAGCTGCTACTGGAACCGGGACTACTCCTGCGAGCTTTTCTTCTGTCTCCGTTTCTGTCAGAGGTGGCGCCGGCTCGGGCTCCCTCTCTTCGTCTTCGACTTCTTCCTCTCTCTCCCTCTCTCGGCCGCAGGCCTTCTCCGGACCCACCCCTTTTATCCTGGGCAAGCGCGTAAGAACCGACGACGACGGAGGCGCTGCAGCTAAAGACGAAGGCGTATCCGTGGGTCCCACGGTGGGCTCCATAGTCGGTCCGGCCGCCGGTGGCTACTGGGCCATTCCTGCTAGACCGGACTTTGGGCAGATATGGAGCTTCGCGGCAGCGACGGGAACGCCGGAATTGATTCAGCCGTCGTCGGTGGCTCAACAAGCTTCTTTGTTTATTCAGCAGCAGCAACAGTCGATTGGGGAGGCTTCGGCGGCTAGGGTAGGGAATTACCTTCCGGGACATTTGAATTTACTAGCTTCATTATCAGGTGGACACGGCAATACAGGTCGGAGAGAAGACGACCAACGTTGA 783 57.34 MSNSEGGNNGVVNGAVIDSQRQQPPSNGAIVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAGSGSLSSSSTSSSLSLSRPQAFSGPTPFILGKRVRTDDDGGAAAKDEGVSVGPTVGSIVGPAAGGYWAIPARPDFGQIWSFAAATGTPELIQPSSVAQQASLFIQQQQQSIGEASAARVGNYLPGHLNLLASLSGGHGNTGRREDDQR 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2600214 2600996 - Bda011845.1 Bda15g00075 21770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00075 260 MobiDBLite consensus disorder prediction 34 49 - -
Bda15g00075 260 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 257 IPR005333 GO:0003700
Bda15g00075 260 Pfam TCP family transcription factor 37 120 IPR017887 -
Bda15g00075 260 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 257 - -
Bda15g00075 260 MobiDBLite consensus disorder prediction 1 27 - -
Bda15g00075 260 MobiDBLite consensus disorder prediction 112 132 - -
Bda15g00075 260 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Bda15g00075 260 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00075 Bda-Chr15:2600214 Bda14g00846 Bda-Chr14:6520571 4.98E-40 dispersed
Bda15g00075 Bda-Chr15:2600214 Bda15g00079 Bda-Chr15:2766786 0 proximal
Bda14g00462 Bda-Chr14:3323927 Bda15g00075 Bda-Chr15:2600214 1.25E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17136 PF03634 TCP 2.20E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00075 K16221 - cpap:110813909 323.939